RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 PRAMEF1O95521 474 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 PRAMEF12O95522 483 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ADAP00813 363 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CYP17A1P05093 508 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 GSTM1P09488 218 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SRCP12931 536 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 AZGP1P25311 298 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ACRV1P26436 265 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 KIR2DL3P43628 341 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SLC6A12P48065 614 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RPIAP49247 311 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CRYBA2P53672 197 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 MRPL28Q13084 256 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SP140Q13342 867 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RIN1Q13671 783 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 PYDC2Q56P42 97 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ZMAT1Q5H9K5 638 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 LIPJQ5W064 366 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TRIQKQ629K1 86 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 FRMPD2BQ6IN97 320 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 LSMEM1Q8N8F7 131 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SMG7Q92540 1137 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 VPS35Q96QK1 796 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CITED4Q96RK1 184 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 LYSMD1Q96S90 227 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 FAM129BQ96TA1 746 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TMEM38AQ9H6F2 299 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TSR3Q9UJK0 312 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SLC25A13Q9UJS0 675 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 GPSM3Q9Y4H4 160 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 PCDHB9Q9Y5E1 797 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 DSPPQ9NZW4 1301 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 OR5K3A6NET4 321 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 K7ERQ8 282 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 STK25O00506 426 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CSO75390 466 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HIST1H2AGP0C0S8 130 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CKMT1AP12532 417 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HLA-EP13747 358 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TYRP14679 529 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RHCEP18577 417 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HIST1H2ADP20671 130 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SERPINA4P29622 427 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 XCR1P46094 333 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CLDN20P56880 219 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 NTHL1P78549 312 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RAB30Q15771 203 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 BTBD16Q32M84 506 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 DGKKQ5KSL6 1271 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 GCNT6Q5T4J0 391 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ATXN7L2Q5T6C5 722 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 CPTPQ5TA50 214 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 FAM109BQ6ICB4 259 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 LKAAEAR1Q8TD35 194 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HIST1H2AHQ96KK5 128 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ZSWIM3Q96MP5 696 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 HIST1H2AJQ99878 128 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 H2AFJQ9BTM1 129 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 MIXL1Q9H2W2 232 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ASB8Q9H765 288 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ABCB9Q9NP78 766 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TMEM184CQ9NVA4 438 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 DNAJC11Q9NVH1 559 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RLIMQ9NVW2 624 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 OBP2AQ9NY56 170 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TEKT2Q9UIF3 430 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 RAB23Q9ULC3 237 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 FNDC3AQ9Y2H6 1198 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 YBX2Q9Y2T7 364 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF451Q9Y4E5 1061 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ENPP4Q9Y6X5 453 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 A0A0B4J293 547 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 A0A0X1KG70 313 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TLR4O00206 839 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 RNASET2O00584 256 aaKnown RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 PLA2G10O15496 165 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 CDRT1O95170 752 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 GADD45GO95257 159 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 POP4O95707 220 aaKnown RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 B3GALT4O96024 378 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TRBC1P01850 177 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 MPC1LP0DKB6 136 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 GAAP10253 952 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 CEBPBP17676 345 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 NAT1P18440 290 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 RRAS2P62070 204 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 NFATC2Q13469 925 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 OCLNQ16625 522 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TATDN3Q17R31 274 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF630Q2M218 657 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 CDONQ4KMG0 1287 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 CRB2Q5IJ48 1285 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 SIX5Q8N196 739 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 CBARPQ8N350 705 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TTC16Q8NEE8 873 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms