RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FIGNL1Q6PIW4 674 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TMCO2Q7Z6W1 182 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 SLC15A3Q8IY34 581 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 KCNRGQ8N5I3 272 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NAT16Q8N8M0 369 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NHLRC2Q8NBF2 726 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 OR13C3Q8NGS6 347 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TSSK6Q9BXA6 273 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 RXFP3Q9NSD7 469 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TNFSF13BQ9Y275 285 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CAPN5O15484 640 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 FMO6PO60774 539 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SCN2BO60939 215 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SYN1P17600 705 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 S100A7P31151 101 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 EPHX2P34913 555 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TAS2R30P59541 319 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BAMBIQ13145 260 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ATAT1Q5SQI0 421 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PHYHD1Q5SRE7 291 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 RBM23Q86U06 439 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 FNDC9Q8TBE3 224 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CANT1Q8WVQ1 401 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF606Q8WXB4 792 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NT5C3BQ969T7 300 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FOXRED1Q96CU9 486 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 FAM46AQ96IP4 442 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 SPIN2AQ99865 258 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SPIN2BQ9BPZ2 258 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF251Q9BRH9 671 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 OR8D2Q9GZM6 311 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NAALAD2Q9Y3Q0 740 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HCN4Q9Y3Q4 1203 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 J3QLW9 94 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF19P17023 458 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NFYAP23511 347 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 BRCC3P46736 316 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 THBS3P49746 956 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NTRK3Q16288 839 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 LRRC28Q86X40 367 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 LACC1Q8IV20 430 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 OR5H2Q8NGV7 314 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 XAGE5Q8WWM1 108 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HSH2DQ96JZ2 352 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF317Q96PQ6 595 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 POP1Q99575 1024 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TOLLIPQ9H0E2 274 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GBA3Q9H227 469 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 KLHL13Q9P2N7 655 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HIVEP3Q5T1R4 2406 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CYB561D2O14569 222 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CHEK1O14757 476 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DIRAS3O95661 229 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CA5AP35218 305 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PLA2G7Q13093 441 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TRAM2Q15035 370 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 KCNJ8Q15842 424 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 RAB11BQ15907 218 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SFT2D3Q587I9 215 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CLEC9AQ6UXN8 241 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 OR10K1Q8NGX5 313 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ZUFSPQ96AP4 578 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CELF6Q96J87 481 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 C11orf84Q9BUA3 381 aaPredicted RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 SCPEP1Q9HB40 452 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 AMBNQ9NP70 447 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GAR1Q9NY12 217 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 SPHK1Q9NYA1 384 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NLKQ9UBE8 527 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 VWA7Q9Y334 891 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PTCH2Q9Y6C5 1203 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 DSCAML1Q8TD84 2053 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 hCG_1818297A0A087WSY0 165 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 M0QZK8 103 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GGCTO75223 188 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 CD3GP09693 182 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NPBWR1P48145 328 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SOX9P48436 509 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 SNRPD1P62314 119 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 IL13RA1P78552 427 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 YIF1BQ5BJH7 314 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 KDM8Q8N371 416 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TSTD1Q8NFU3 115 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PARK7Q99497 189 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 SRA1Q9HD15 236 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 SLC22A11Q9NSA0 550 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 AGLP35573 1532 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 RD3LP0DJH9 198 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 PRPH2P23942 346 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 CPT1AP50416 773 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 TGFB2P61812 414 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 RPS13P62277 151 aaKnown RBP5.94□□□□□ -1.46
VCAN-203ENST00000343200 RAP1AP62834 184 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 HSPB3Q12988 150 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 GDPGP1Q6ZNW5 385 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 ABHD11Q8NFV4 315 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 OR2T11Q8NH01 316 aa5.94□□□□□ -1.46
VCAN-203ENST00000343200 NFKBIDQ8NI38 313 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms