RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 PRODH2Q9UF12 536 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 PAX6P26367 422 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 EPS8L1Q8TE68 723 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 AGAP14A8MT82 685 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SAP18O00422 153 aaKnown RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 TOXO94900 526 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 DCNP07585 359 aaKnown RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 MGST1P10620 155 aaKnown RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 LRRC32Q14392 662 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 ABHD12BQ7Z5M8 362 aaPredicted RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 LENG8Q96PV6 779 aaPredicted RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 LHX5Q9H2C1 402 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 NOMO3P69849 1222 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 NOMO1Q15155 1222 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SLC18B1Q6NT16 456 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 PELOQ9BRX2 385 aaKnown RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SLC19A3Q9BZV2 496 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 TRBV2A0A0J9YWF9 115 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 IGKV5-2P06315 115 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 MAP4K3Q8IVH8 894 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 HAVCR2Q8TDQ0 301 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SLC5A11Q8WWX8 675 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 FAM170BA6NMN3 283 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 ACOT7O00154 380 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SLC1A7O00341 560 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 TLE4Q04727 773 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 CTC1Q2NKJ3 1217 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 FLYWCH1Q4VC44 716 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 TMPRSS12Q86WS5 348 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 OR1J4Q8NGS1 313 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 HAPLN3Q96S86 360 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 HLA-HP01893 362 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 NHLRC2Q8NBF2 726 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 TGM5O43548 720 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ENGP17813 658 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 PLPP4Q5VZY2 271 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 PAOXQ6QHF9 649 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 M1APQ8TC57 530 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 MAGEH1Q9H213 219 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 COL1A2P08123 1366 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 BTBD17A6NE02 478 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SERPINE2P07093 398 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 AK4P27144 223 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 OR51I1Q9H343 314 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF223Q9UK11 482 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 C17orf112F2Z3M2 114 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 XRCC1P18887 633 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SCNN1AP37088 669 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 GPR143P51810 404 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 PRAMEF14Q5SWL7 426 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 OR9A2Q8NGT5 310 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 IRGQQ8WZA9 623 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 PITX2Q99697 317 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 WDR55Q9H6Y2 383 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SLC27A5Q9Y2P5 690 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 KIF1AQ12756 1690 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 GABARAPH6UMI1 98 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 GABARAPO95166 117 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF182P17025 639 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ADH7P40394 386 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 STEAP3Q658P3 488 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 TCAF1Q9Y4C2 921 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SNAP29O95721 258 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 CFIP05156 583 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 TCTE3Q8IZS6 198 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 NDNFQ8TB73 568 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 EIF2B3Q9NR50 452 aaKnown RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 PI4KAP42356 2102 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 TGFB2P61812 414 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 HIST2H3PS2Q5TEC6 136 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 LSMEM2Q8N112 164 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SLC17A7Q9P2U7 560 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 ZIC2O95409 532 aaPredicted RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 GRB2P62993 217 aaKnown RBP16.98■□□□□ 0.31
SMAD4-201ENST00000342988 MSMO1Q15800 293 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 UEVLDQ8IX04 471 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 SPPL2BQ8TCT7 592 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 OR52A5Q9H2C5 316 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 CNTN6Q9UQ52 1028 aa16.98■□□□□ 0.31
SMAD4-201ENST00000342988 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 JPH3Q8WXH2 748 aaPredicted RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 IL36AQ9UHA7 158 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CPA4Q9UI42 421 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PRELID3BQ9Y3B1 194 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 NSA2O95478 260 aaKnown RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 OLFM2O95897 454 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 EEFSECP57772 596 aaKnown RBP16.97■□□□□ 0.31
SMAD4-201ENST00000342988 INHBEP58166 350 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 RAB8AP61006 207 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 PMS2P3Q13401 168 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 UGCGQ16739 394 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 ABCB8Q9NUT2 735 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CLEC4EQ9ULY5 219 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 H3BSH0 61 aa16.97■□□□□ 0.31
SMAD4-201ENST00000342988 CCINQ13939 588 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms