RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PURGQ9UJV8 347 aaKnown RBP17.68■□□□□ 0.42
SMPD1-201ENST00000342245 PPT2Q9UMR5 302 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 SLC6A14Q9UN76 642 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 EXO1Q9UQ84 846 aaKnown RBP17.68■□□□□ 0.42
SMPD1-201ENST00000342245 PCDHB11Q9Y5F2 797 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 DNMT3AQ9Y6K1 912 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-201ENST00000342245 A0A1B0GW55 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SELENOFO60613 162 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 FCER2P06734 321 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 ADRB1P08588 477 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L2P0CJ85 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L3P0CJ86 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L4P0CJ87 422 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L5P0CJ88 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L6P0CJ89 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4L7P0CJ90 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 PRPS1L1P21108 318 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 CRYZQ08257 329 aaKnown RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 FGL1Q08830 312 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 MADCAM1Q13477 382 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 LY6KQ17RY6 165 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 CD200R1LQ6Q8B3 271 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 BHLHA9Q7RTU4 235 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 UMODL1-AS1Q8N2C9 162 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 OR52J3Q8NH60 311 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SFXN2Q96NB2 322 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 TTYH1Q9H313 450 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DUX4Q9UBX2 424 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 PPIEQ9UNP9 301 aaKnown RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 RAI2Q9Y5P3 530 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SLC28A2O43868 658 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 NMBP08949 121 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 LIMS1P48059 325 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 PIK3CGP48736 1102 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 WNT4P56705 351 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 CYP4F8P98187 520 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SLC10A7Q0GE19 358 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 PTPRCAPQ14761 206 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 B3GNTL1Q67FW5 361 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 LINC01465Q8N7H1 131 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 C11orf65Q8NCR3 313 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 OR9Q2Q8NGE9 314 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 OR8J1Q8NGP2 316 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 FCRL2Q96LA5 508 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 PIP5K1AQ99755 562 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SMOQ99835 787 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 TSSK6Q9BXA6 273 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 FN3KQ9H479 309 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 MARK1Q9P0L2 795 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 ZFR2Q9UPR6 939 aaKnown RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 SF3B6Q9Y3B4 125 aaKnown RBP17.67■□□□□ 0.42
SMPD1-201ENST00000342245 DSPPQ9NZW4 1301 aa17.67■□□□□ 0.42
SMPD1-201ENST00000342245 OR6C65A6NJZ3 312 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 KPNA3O00505 521 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TCRBP04435 133 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 AHCYP23526 432 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 AVPR1BP47901 424 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 EIF4EBP2Q13542 120 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CASP12Q6UXS9 341 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CAMKVQ8NCB2 501 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 SCARB1Q8WTV0 552 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TMEM203Q969S6 136 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 GTPBP3Q969Y2 492 aaKnown RBP17.66■□□□□ 0.42
SMPD1-201ENST00000342245 MYO19Q96H55 970 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 ZCCHC4Q9H5U6 513 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 BIN3Q9NQY0 253 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CYB5R1Q9UHQ9 305 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 DLGAP4Q9Y2H0 992 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 PTCH2Q9Y6C5 1203 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 EVPLQ92817 2033 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TRAV6A0A075B6T7 132 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 NIPSNAP2O75323 286 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 PSMA3P25788 255 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 RAB13P51153 203 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CRYBA2P53672 197 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CTBP2P56545 445 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 RBBP4Q09028 425 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 SGO1Q5FBB7 561 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 AQP11Q8NBQ7 271 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 OR2T35Q8NGX2 323 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CMTM7Q96FZ5 175 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TSSK3Q96PN8 268 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 IL4I1Q96RQ9 567 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TRIB3Q96RU7 358 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 DPH2Q9BQC3 489 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-201ENST00000342245 CXCL16Q9H2A7 254 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 TLR8Q9NR97 1041 aaKnown RBP17.66■□□□□ 0.42
SMPD1-201ENST00000342245 GKN1Q9NS71 199 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 MLXQ9UH92 298 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 OTOFQ9HC10 1997 aa17.66■□□□□ 0.42
SMPD1-201ENST00000342245 GNB5O14775 395 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 IRAK2O43187 625 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SMAD6O43541 496 aaKnown RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 PLATP00750 562 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ZNF140P52738 457 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 PDSS1Q5T2R2 415 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SBSNQ6UWP8 590 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms