RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NFE2L1Q14494 772 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 STK11Q15831 433 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 LRRC37A5PQ49AS3 106 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 MAFIPQ8WZ33 124 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 FANCGO15287 622 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 DENRO43583 198 aaKnown RBP13.32□□□□□ -0.28
EDEM3-201ENST00000318130 NPPAP01160 153 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 DNAJB1P25685 340 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 RAB28P51157 221 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 PGGT1BP53609 377 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 CDKL4Q5MAI5 379 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 DERL2Q9GZP9 239 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 ERVK13-1Q9NX77 482 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 EDARQ9UNE0 448 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 F8A1P23610 371 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 RGS19P49795 217 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SEC23BQ15437 767 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 GPR33Q49SQ1 333 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 Q6ZVL8 140 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 LINC00471Q8N535 108 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SCGB3A2Q96PL1 93 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SDHAF3Q9NRP4 125 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 GSKIPQ9P0R6 139 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 B4GALT6Q9UBX8 382 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 Q9Y3F1 56 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SOCS2O14508 198 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 NR0B2Q15466 257 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 CST6Q15828 149 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 CDHR3Q6ZTQ4 885 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 NPAS3Q8IXF0 933 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SH2B3Q9UQQ2 575 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SDHDO14521 159 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 ANXA3P12429 323 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 E2F1Q01094 437 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SLC15A4Q8N697 577 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
EDEM3-201ENST00000318130 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
EDEM3-201ENST00000318130 FAM120CQ9NX05 1096 aaKnown RBP13.32□□□□□ -0.28
EDEM3-201ENST00000318130 SLIT2O94813 1529 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PROM1O43490 865 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 RNF13O43567 381 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 C6orf47O95873 294 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 APOC3P02656 99 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 HLCSP50747 726 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 OR4D2P58180 307 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 RFTN1Q14699 578 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 CST9Q5W186 159 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 BEND4Q6ZU67 534 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 CEP97Q8IW35 865 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PRR22Q8IZ63 422 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PQLC3Q8N755 202 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 MOCOSQ96EN8 888 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 TOE1Q96GM8 510 aaKnown RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 ZNF670-ZNF695F2Z2N8 137 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SLC6A11P48066 632 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 ST3GAL3Q11203 375 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 ZNF630Q2M218 657 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 Q8N402 240 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 OR10T2Q8NGX3 314 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SHKBP1Q8TBC3 707 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SLC22A18Q96BI1 424 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 RANBP3Q9H6Z4 567 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SACM1LQ9NTJ5 587 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 FAIMQ9NVQ4 179 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SMOXQ9NWM0 555 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 C19orf25Q9UFG5 118 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PADI2Q9Y2J8 665 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 DNASE1P24855 282 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 DNAJB13P59910 316 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 MAD2L1BPQ15013 274 aaPredicted RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 KIAA1191Q96A73 305 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 TSNAXQ99598 290 aaKnown RBP13.31□□□□□ -0.28
EDEM3-201ENST00000318130 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PISDQ9UG56 409 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 WASHC1A8K0Z3 465 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 WASH3PC4AMC7 463 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PTGR1Q14914 329 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 WASH2PQ6VEQ5 465 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 CILP2Q8IUL8 1156 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■■■ 32.9
EDEM3-201ENST00000318130 TMEM185BQ9H7F4 350 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 C2orf74A8MZ97 194 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 KIAA0513O60268 411 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 CD70P32970 193 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 RNF130Q86XS8 419 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 SCRN2Q96FV2 425 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PCYT2Q99447 389 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
EDEM3-201ENST00000318130 AGTR2P50052 363 aa13.3□□□□□ -0.28
EDEM3-201ENST00000318130 S100A12P80511 92 aa13.3□□□□□ -0.28
EDEM3-201ENST00000318130 PON3Q15166 354 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms