RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TEX35Q5T0J7 233 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 H2AFVQ71UI9 128 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF571Q7Z3V5 609 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SYCE1Q8N0S2 351 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 FAM46BQ96A09 425 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TMEM143Q96AN5 459 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CCDC127Q96BQ5 260 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 NDNQ99608 321 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ATG101Q9BSB4 218 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TLE6Q9H808 572 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 UBE2TQ9NPD8 197 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 XPNPEP1Q9NQW7 623 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TMEM161AQ9NX61 479 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TRPC4Q9UBN4 977 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MOSPD1Q9UJG1 213 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 NOCTQ9UK39 431 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 APPL1Q9UKG1 709 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TFR2Q9UP52 801 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MYH11P35749 1972 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SCN4AP35499 1836 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 GOLGA8IPA6NC78 632 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SDR42E2A6NKP2 422 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 GOLGA8JA6NMD2 632 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PROB1E7EW31 1015 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TULP2O00295 520 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PGRMC2O15173 223 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ATP8B1O43520 1251 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 BUB1O43683 1085 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SYNGR3O43761 229 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SNX3O60493 162 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RNASEH1O60930 286 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ATP1A1P05023 1023 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 DARSP14868 501 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MSH3P20585 1137 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 GLRA2P23416 452 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ADSSP30520 456 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 DSCR9P59020 149 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 IL1RL1Q01638 556 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MAP2K1Q02750 393 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CYP24A1Q07973 514 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TFDP1Q14186 410 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 EPC2Q52LR7 807 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CNSTQ6PJW8 725 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SIGLEC15Q6ZMC9 328 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RABEPKQ7Z6M1 372 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RPAINQ86UA6 219 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 AMIGO1Q86WK6 493 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CBWD2Q8IUF1 395 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ZBTB8OSQ8IWT0 167 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RYBPQ8N488 228 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CLEC1AQ8NC01 280 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 FBXL13Q8NEE6 735 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 KBTBD8Q8NFY9 601 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LMO3Q8TAP4 145 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LRRC8CQ8TDW0 803 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ATP8B4Q8TF62 1192 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 U2AF1L4Q8WU68 220 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 HSD17B8Q92506 261 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TAF4BQ92750 862 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RTP4Q96DX8 246 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SLC47A1Q96FL8 570 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 FCRL4Q96PJ5 515 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 AGPAT1Q99943 283 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 FAM213AQ9BRX8 229 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TCHPQ9BT92 498 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 URM1Q9BTM9 101 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CCDC94Q9BW85 323 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PARD6BQ9BYG5 372 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TMEM117Q9H0C3 514 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TCF7L2Q9NQB0 619 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PNPLA3Q9NST1 481 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 RAB20Q9NX57 234 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 SNX12Q9UMY4 172 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 COQ4Q9Y3A0 265 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 HYOU1Q9Y4L1 999 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 STYXL1Q9Y6J8 313 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ATP8B3O60423 1300 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LOC285556D6RIA3 1793 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 A0A0G2JMZ2 1700 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C17orf105B2RV13 164 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PRAC2D3DTV9 90 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 H3BMM5 538 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CLDN3O15551 220 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PIGRP01833 764 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 ALPLP05186 524 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 C8orf89P0DMQ9 161 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 H2AFXP16104 143 aaPredicted RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 TNNI1P19237 187 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 CA4P22748 312 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 PIK3R1P27986 724 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SSTR1P30872 391 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 RPL21P46778 160 aaKnown RBP3.67□□□□□ -1.82
SMCO3-201ENST00000316048 NPBWR1P48145 328 aa3.67□□□□□ -1.82
SMCO3-201ENST00000316048 SERPINH1P50454 418 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms