RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 STT3AP46977 705 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 NR1H2P55055 460 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ADARP55265 1226 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 ARF3P61204 181 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 OC90Q02509 493 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 NFYCQ13952 458 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 LINC00299Q6ZSB3 139 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TMEM26Q6ZUK4 368 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ZNF765Q7L2R6 523 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 RTL10Q7L3V2 364 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TMEM132CQ8N3T6 1108 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PACRGLQ8N7B6 248 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PTCHD1Q96NR3 888 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 OR52E6Q96RD3 313 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PANX1Q96RD7 426 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 C1QTNF3Q9BXJ4 246 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TUBB1Q9H4B7 451 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 LRTM1Q9HBL6 345 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 EML4Q9HC35 981 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 AKIP1Q9NQ31 210 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 RIC8BQ9NVN3 520 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ANKMY1Q9P2S6 941 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 POLG2Q9UHN1 485 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 KCND3Q9UK17 655 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PCTPQ9UKL6 214 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ANGPT4Q9Y264 503 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PCDHGB1Q9Y5G3 927 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ASH1LQ9NR48 2969 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 HIVEP3Q5T1R4 2406 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 EFCAB7A8K855 629 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ARHGAP33O14559 1287 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 POLR1CO15160 346 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 B4GAT1O43505 415 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TIAF1O95411 115 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 OTCP00480 354 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CHRM5P08912 532 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 IMPDH1P20839 514 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 PFN3P60673 137 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ATP6V0D1P61421 351 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ACVR1Q04771 509 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 SLAMF1Q13291 335 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 MED21Q13503 144 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 EXOSC7Q15024 291 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 C1orf146Q5VVC0 180 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 LCN8Q6JVE9 175 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 DCDC5Q6ZRR9 648 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CLYBLQ8N0X4 340 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 AFAP1L2Q8N4X5 818 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 OR52J3Q8NH60 311 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ZNF775Q96BV0 537 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 L3HYPDHQ96EM0 354 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 DERL2Q9GZP9 239 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 GSTO2Q9H4Y5 243 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PALMDQ9NP74 551 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 SLC6A14Q9UN76 642 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PCDHB11Q9Y5F2 797 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 E2F3O00716 465 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 OR7A17O14581 309 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 VEGFDO43915 354 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 KLK8O60259 260 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 NPHS1O60500 1241 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PAPLNO95428 1278 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 IL3P08700 152 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 HSD17B1P14061 328 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CPMP14384 443 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 PFKLP17858 780 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 KRT20P35900 424 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CHI3L1P36222 383 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 TRIM23P36406 574 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TARDBPQ13148 414 aaKnown RBP eCLIP4.69□□□□□ -1.66
CAST-201ENST00000309190 ZNF267Q14586 743 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 C16orf72Q14CZ0 275 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ZIC1Q15915 447 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TMEM52BQ4KMG9 183 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ARHGAP40Q5TG30 622 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 MED27Q6P2C8 311 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 MACC1Q6ZN28 852 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 NRROSQ86YC3 692 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 KLHDC8AQ8IYD2 350 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CSNK1A1LQ8N752 337 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 TTC29Q8NA56 475 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ZUFSPQ96AP4 578 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 ULBP3Q9BZM4 244 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 GRIP2Q9C0E4 1043 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 OR52A5Q9H2C5 316 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 GPN2Q9H9Y4 310 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 ZBTB20Q9HC78 741 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 PARD6AQ9NPB6 346 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 KLHL1Q9NR64 748 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 CCM2LQ9NUG4 571 aaPredicted RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 SMOXQ9NWM0 555 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 SH3GLB1Q9Y371 365 aa4.69□□□□□ -1.66
CAST-201ENST00000309190 MRPS18BQ9Y676 258 aaKnown RBP4.69□□□□□ -1.66
CAST-201ENST00000309190 SLC5A10A0PJK1 596 aa4.68□□□□□ -1.66
CAST-201ENST00000309190 MYO1GB0I1T2 1018 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms