RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ARHGEF33A8MVX0 844 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 H3BNC9 293 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 WISP3O95389 354 aaPredicted RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 POU2F2P09086 479 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 LHCGRP22888 699 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 UQCRC1P31930 480 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 NNMTP40261 264 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CCT3P49368 545 aaKnown RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ACVR1Q04771 509 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CBLBQ13191 982 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 FCRLBQ6BAA4 426 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 HIST2H2AA3Q6FI13 130 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 AMIGO1Q86WK6 493 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF461Q8TAF7 563 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 SUN5Q8TC36 379 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 BCL7CQ8WUZ0 217 aaPredicted RBP13.91□□□□□ -0.18
PTPN9-201ENST00000306726 LRR1Q96L50 414 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 CFL2Q9Y281 166 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 DOCK6Q96HP0 2047 aa13.91□□□□□ -0.18
PTPN9-201ENST00000306726 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 FGF19O95750 216 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 MRPL3P09001 348 aaKnown RBP13.9□□□□□ -0.18
PTPN9-201ENST00000306726 LINC00271P0C7V0 271 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SRCP12931 536 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 CHMP24386 653 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 RORCP51449 518 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 IFITM2Q01629 132 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 TIMM50Q3ZCQ8 353 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 TTC23LQ6PF05 361 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 ELMOD2Q8IZ81 293 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 NDRG4Q9ULP0 352 aaKnown RBP13.9□□□□□ -0.18
PTPN9-201ENST00000306726 FAM186AA6NE01 2351 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 BTN3A3O00478 584 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 GMFGO60234 142 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SLC2A2P11168 524 aaPredicted RBP13.9□□□□□ -0.18
PTPN9-201ENST00000306726 RPS3P23396 243 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SSTR2P30874 369 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 MTA1Q13330 715 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 ZXDCQ2QGD7 858 aaPredicted RBP13.9□□□□□ -0.18
PTPN9-201ENST00000306726 WSCD2Q2TBF2 565 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SLC46A3Q7Z3Q1 461 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 OR2AP1Q8NGE2 309 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 OR51V1Q9H2C8 321 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 PSORS1C1Q9UIG5 152 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 FBXW2Q9UKT8 454 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 YIPF1Q9Y548 306 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 RP1P56715 2156 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SCN3AQ9NY46 2000 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 PPM1DO15297 605 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 SYPP08247 313 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 IL7P13232 177 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 CD22P20273 847 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 CPN2P22792 545 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 GGT2P36268 569 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 TGFBR2P37173 567 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 CLCN4P51793 760 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 EPHB3P54753 998 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 GPM6BQ13491 265 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 GINS1Q14691 196 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 COMMD6Q7Z4G1 85 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 LILRB4Q8NHJ6 448 aa13.9□□□□□ -0.18
PTPN9-201ENST00000306726 A8MUA0 341 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 ABLIM3O94929 683 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 OR12D1P0DN82 309 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 RPL6Q02878 288 aaKnown RBP13.9□□□□□ -0.19
PTPN9-201ENST00000306726 KIAA0040Q15053 153 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 FLYWCH1Q4VC44 716 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 CLIP3Q96DZ5 547 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 UCK2Q9BZX2 261 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 P2RY12Q9H244 342 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.19
PTPN9-201ENST00000306726 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 IGLV3-10A0A075B6K4 115 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 CXCL14O95715 111 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 RAB15P59190 212 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 PTSQ03393 145 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 CBLL1Q75N03 491 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 TCEAL8Q8IYN2 117 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 FLCNQ8NFG4 579 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 PJA1Q8NG27 643 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 C11orf54Q9H0W9 315 aaPredicted RBP13.89□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF226Q9NYT6 803 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 H7BY64 318 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 TSPAN4O14817 238 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 HRO43593 1189 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 LILRB3O75022 631 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 UGT2B17O75795 530 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 CA3P07451 260 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 ANXA8P13928 327 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 LASP1Q14847 261 aaKnown RBP13.89□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF181Q2M3W8 571 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 ZNF750Q32MQ0 723 aa13.89□□□□□ -0.19
PTPN9-201ENST00000306726 MED27Q6P2C8 311 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms