RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ESX1Q8N693 406 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 LILRA3Q8N6C8 439 aaPredicted RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 KRTCAP2Q8N6L1 136 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 OR7A2PQ8NGA2 310 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 MOCOSQ96EN8 888 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 RNF121Q9H920 327 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 E7ENX8 843 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CHST10O43529 356 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TIPRLO75663 272 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 OR12D1P0DN82 309 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 EEFSECP57772 596 aaKnown RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 SH3BP2P78314 561 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TAP2Q03519 686 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TMEM215Q68D42 235 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 UBQLNLQ8IYU4 475 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 LMNTD1Q8N9Z9 388 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 IFT27Q9BW83 186 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CD93Q9NPY3 652 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SERGEFQ9UGK8 458 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 IFT52Q9Y366 437 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 MOSPD3O75425 235 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 MT-ND1P03886 318 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 GPIP06744 558 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CKMT2P17540 419 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 IMPA1P29218 277 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SLC5A2P31639 672 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SLC19A1P41440 591 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SELENOVP59797 346 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 KLHL26Q53HC5 615 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 MFSD9Q8NBP5 474 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 PDPRQ8NCN5 879 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 OR6N1Q8NGY5 312 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CCL4L1Q8NHW4 92 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 GEMIN6Q8WXD5 167 aaKnown RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 RSC1A1Q92681 617 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 OSBPL10Q9BXB5 764 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 BHLHE41Q9C0J9 482 aaPredicted RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 SMOC1Q9H4F8 434 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 NOX1Q9Y5S8 564 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 FOCADQ5VW36 1801 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SLCO2B1O94956 709 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CHRNB1P11230 501 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CYP4B1P13584 511 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 HTR6P50406 440 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TRIM25Q14258 630 aaKnown RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 PPP1R3AQ16821 1122 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 SMARCD3Q6STE5 483 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 NANOGNBQ7Z5D8 188 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TECPR1Q7Z6L1 1165 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 OAFQ86UD1 273 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 PAQR7Q86WK9 346 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 GIPC3Q8TF64 312 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 LOXL2Q9Y4K0 774 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 PSME4Q14997 1843 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 BLACEA4D250 179 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PIAS2O75928 621 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 SEMA3DO95025 777 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 RETP07949 1114 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 HIST1H1TP22492 207 aaPredicted RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 METAP1P53582 386 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 RCAN2Q14206 197 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PUM1Q14671 1186 aaKnown RBP eCLIP8.8□□□□□ -1
PTPRE-202ENST00000306042 GANABQ14697 944 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 GPR19Q15760 415 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 LETMD1Q6P1Q0 360 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C6orf15Q6UXA7 325 aaPredicted RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 NLRP8Q86W28 1048 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 VWA5B2Q8N398 1253 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 OR51Q1Q8NH59 317 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 OR14L1PQ8NHC6 308 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 WDR60Q8WVS4 1066 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 MRGPRX3Q96LB0 322 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ELL3Q9HB65 397 aaPredicted RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 WASH6PQ9NQA3 447 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C14orf105Q9NVL8 296 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C5AR2Q9P296 337 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 DNAJC15Q9Y5T4 150 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PTGDR2Q9Y5Y4 395 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 NPIPA5E9PKD4 350 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ZFAND5O76080 213 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TNFSF15O95150 251 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 RENP00797 406 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ZNF28P17035 718 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PGCP20142 388 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -1
PTPRE-202ENST00000306042 GRB7Q14451 532 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C6orf120Q7Z4R8 191 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 GALNT10Q86SR1 603 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 FITM2Q8N6M3 262 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 BBS10Q8TAM1 723 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ASB12Q8WXK4 309 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 LRMDAQ9H2I8 198 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 NLGN3Q9NZ94 848 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 NPIPA1Q9UND3 350 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 SCAMP2O15127 329 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 VILLO15195 856 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 GSC2O15499 205 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 LDB3O75112 727 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 CEACAM5P06731 702 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms