RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 ABCG2Q9UNQ0 655 aa12.88□□□□□ -0.35
HPS3-201ENST00000296051 FAM25EA8MYX2 175 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 GRIK2Q13002 908 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 C3orf58Q8NDZ4 430 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 EFCAB11Q9BUY7 163 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 TBL1XR1Q9BZK7 514 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 ZNF860A6NHJ4 632 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 INMT-MINDY4F8WBC2 141 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 NUAK1O60285 661 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 GSRP00390 522 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PSMD4P55036 377 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 GABARAPL2P60520 117 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 SPHARQ15513 63 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 BCL7AQ4VC05 210 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 TGM7Q96PF1 710 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PDCD10Q9BUL8 212 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 RBCK1Q9BYM8 510 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 UCK2Q9BZX2 261 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 RDH8Q9NYR8 311 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 TSPAN6O43657 245 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 HCN1O60741 890 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 H1F0P07305 194 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 SYPP08247 313 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 LAMP1P11279 417 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 HSD17B2P37059 387 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 STARP49675 285 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 ERVFC1P60507 584 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 DSTNP60981 165 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 COQ5Q5HYK3 327 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 SHQ1Q6PI26 577 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PLA2G15Q8NCC3 412 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 ZNF431Q8TF32 576 aaPredicted RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 GEMIN6Q8WXD5 167 aaKnown RBP12.87□□□□□ -0.35
HPS3-201ENST00000296051 APIPQ96GX9 242 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PSKH2Q96QS6 385 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 ANKMY1Q9P2S6 941 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 UGT2A1Q9Y4X1 527 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
HPS3-201ENST00000296051 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 STAT5AP42229 794 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 PER3P56645 1201 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 NRG3P56975 720 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
HPS3-201ENST00000296051 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 SPRED1Q7Z699 444 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 B3GNT8Q7Z7M8 397 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 CELF2-AS1Q8N7Q2 184 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 DNAJB8Q8NHS0 232 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 NEUROD4Q9HD90 331 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 ADAM12O43184 909 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 DNAJB5O75953 348 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SOX3P41225 446 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ZNF81P51508 661 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ADPRMQ3LIE5 342 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 OR6C4Q8NGE1 309 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 UBXN10Q96LJ8 280 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SLC2A11Q9BYW1 496 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SLITRK2Q9H156 845 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 TAS2R7Q9NYW3 318 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 A0A1W2PPK0 400 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 LATO43561 262 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ZNF217O75362 1048 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 HNF1BP35680 557 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 STEAP3Q658P3 488 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 THOC6Q86W42 341 aaKnown RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 SAMD14Q8IZD0 417 aaPredicted RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 PELI3Q8N2H9 469 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.35
HPS3-201ENST00000296051 TAS2R16Q9NYV7 291 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 UTS2RQ9UKP6 389 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms