RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 MICAQ29983 383 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 SLC30A8Q8IWU4 369 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 TBC1D19Q8N5T2 526 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 ACOT4Q8N9L9 421 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 ZNF540Q8NDQ6 660 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 OR9Q2Q8NGE9 314 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 RPLP0P6Q8NHW5 317 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 ZNF566Q969W8 418 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 OTUB1Q96FW1 271 aaPredicted RBP13.27□□□□□ -0.28
NXF1-201ENST00000294172 BBS4Q96RK4 519 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 GLIPR2Q9H4G4 154 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 SYNPO2LQ9H987 977 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 A4GALTQ9NPC4 353 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 SLC35C2Q9NQQ7 365 aa13.27□□□□□ -0.28
NXF1-201ENST00000294172 NINQ8N4C6 2090 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 hCG_2014768A0A024R1R8 64 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ANHXE9PGG2 379 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 HMGN4O00479 90 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 PCDH17O14917 1159 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 KDM1AO60341 852 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 FAM20BO75063 409 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 RASGRP1O95267 797 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 VIPP01282 170 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 IFNW1P05000 195 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 TFPTP0C1Z6 253 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 DRD2P14416 443 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 NDUFV2P19404 249 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.29
NXF1-201ENST00000294172 ACTR1BP42025 376 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 FRKP42685 505 aaPredicted RBP13.27□□□□□ -0.29
NXF1-201ENST00000294172 XCR1P46094 333 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 GSTM5P46439 218 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 PRKAG1P54619 331 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ACTR1AP61163 376 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 TRA2BP62995 288 aaKnown RBP13.27□□□□□ -0.29
NXF1-201ENST00000294172 TUBA3CQ13748 450 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 NFATC4Q14934 902 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ZNF750Q32MQ0 723 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 GTF2IRD2BQ6EKJ0 949 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 GTF2IRD2Q86UP8 949 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 OR5D16Q8NGK9 328 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 CNDP2Q96KP4 475 aaKnown RBP13.27□□□□□ -0.29
NXF1-201ENST00000294172 AMDHD1Q96NU7 426 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 FCRL4Q96PJ5 515 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 NIPSNAP1Q9BPW8 284 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ACSS1Q9NUB1 689 aaPredicted RBP13.27□□□□□ -0.29
NXF1-201ENST00000294172 TRPC4Q9UBN4 977 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 ATG4BQ9Y4P1 393 aa13.27□□□□□ -0.29
NXF1-201ENST00000294172 CCDC88CQ9P219 2028 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 PGRMC2O15173 223 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 SLC28A2O43868 658 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 FOXD2O60548 495 aaPredicted RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 DNAJB5O75953 348 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 GADD45GO95257 159 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 C8orf89P0DMQ9 161 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 OR12D1P0DN82 309 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 DRD1P21728 446 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 NR4A1P22736 598 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 CERS1P27544 350 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 HTR1BP28222 390 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 LTBRP36941 435 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 MAP2K4P45985 399 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 KIAA1024LP59773 190 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 COL9A2Q14055 689 aaPredicted RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 USP30Q70CQ3 517 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 PHF10Q8WUB8 498 aaKnown RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 XAGE5Q8WWM1 108 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 BMFQ96LC9 184 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 WDR92Q96MX6 357 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 GABARAPL3Q9BY60 117 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 SERHL2Q9H4I8 314 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 PRDM7Q9NQW5 492 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 ZCCHC3Q9NUD5 404 aaKnown RBP13.26□□□□□ -0.29
NXF1-201ENST00000294172 ACER3Q9NUN7 267 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 PCDHGA6Q9Y5G7 932 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 ENPP4Q9Y6X5 453 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
NXF1-201ENST00000294172 A0A1W2PR48 441 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 BTN3A3O00478 584 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 CCNA2P20248 432 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 CD72P21854 359 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 PCMT1P22061 227 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 ATP5A1P25705 553 aaKnown RBP13.25□□□□□ -0.29
NXF1-201ENST00000294172 NTSP30990 170 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 AHRP35869 848 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 SLC19A1P41440 591 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 TPMTP51580 245 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 TMBIM6P55061 237 aa13.25□□□□□ -0.29
NXF1-201ENST00000294172 PUM1Q14671 1186 aaKnown RBP eCLIP13.25□□□□□ -0.29
NXF1-201ENST00000294172 C18orf63Q68DL7 685 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms