RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CDC6Q99741 560 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PPP4R1LQ9P1A2 415 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 RTCAO00442 366 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ADH1BP00325 375 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CD97P48960 835 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 GSK3BP49841 420 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CDH15P55291 814 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 DUSP28Q4G0W2 176 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 TWNKQ96RR1 684 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 B3GNT5Q9BYG0 378 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AKTIPQ9H8T0 292 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 GRXCR1A8MXD5 290 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 GGT2P36268 569 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CLCNKAP51800 687 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ABHD18Q0P651 414 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CCINQ13939 588 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF423Q2M1K9 1284 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 THOC6Q86W42 341 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 IQCKQ8N0W5 287 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 SETD7Q8WTS6 366 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ARNTL2Q8WYA1 636 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF419Q96HQ0 510 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PDZD7Q9H5P4 517 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 RRAGCQ9HB90 399 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 FER1L4A9Z1Z3 1794 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CREG1O75629 220 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CDK1P06493 297 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 NDUFV2P19404 249 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 LSSP48449 732 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ARRB1P49407 418 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 IRF9Q00978 393 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 SGCAQ16586 387 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 EXOC3L2Q2M3D2 409 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 WDR45BQ5MNZ6 344 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AGAP7PQ5VUJ5 663 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AGAP6Q5VW22 663 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CANT1Q8WVQ1 401 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AGAP4Q96P64 663 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 SYT3Q9BQG1 590 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 HAO2Q9NYQ3 351 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF638Q14966 1978 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ANKRD34BA5PLL1 514 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 B4GALT2O60909 372 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 RHOP08100 348 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 UCHL1P09936 223 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CD79BP40259 229 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 DHPSP49366 369 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CAV2P51636 162 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 BOLLQ8N9W6 283 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AGXT2Q9BYV1 514 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ERVK13-1Q9NX77 482 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 EFCAB7A8K855 629 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 DNM1LO00429 736 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 CAPN15O75808 1086 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 MRPL3P09001 348 aaKnown RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 ATP1B2P14415 290 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 PRKCAP17252 672 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 XRCC1P18887 633 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 CERS1P27544 350 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 SCNN1AP37088 669 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 GPR143P51810 404 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 UBXN2BQ14CS0 331 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 ILDR1Q86SU0 546 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 GOLM1Q8NBJ4 401 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 CNOT9Q92600 299 aaKnown RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 HAS1Q92839 578 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 MSI2Q96DH6 328 aaKnown RBP8.4□□□□□ -1.07
NIPBL-201ENST00000282516 OR4K3Q96R72 315 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 BTBD2Q9BX70 525 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 GGT3PA6NGU5 568 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 LRCH4O75427 683 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 OR2B3O76000 313 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 PAHP00439 452 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 C7P10643 843 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 SUMF2Q8NBJ7 301 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 PSMG2Q969U7 264 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 ARMC1Q9NVT9 282 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.07
NIPBL-201ENST00000282516 A0A1W2PP18 115 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TOXO94900 526 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 WDPCPO95876 746 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 LCKP06239 509 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF30P17039 623 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PON2Q15165 354 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TGFBIQ15582 683 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM225Q6GV28 225 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HACD2Q6Y1H2 254 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 OR51G2Q8NGK0 314 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms