RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MTERF3Q96E29 417 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CNRIP1Q96F85 164 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 LIN37Q96GY3 246 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GBP5Q96PP8 586 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 BHLHE41Q9C0J9 482 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PAIP1Q9H074 479 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC35C2Q9NQQ7 365 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TMEM45AQ9NWC5 275 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DLL3Q9NYJ7 618 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 AKAP7Q9P0M2 348 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GMPR2Q9P2T1 348 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CTSFQ9UBX1 484 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 WBP11Q9Y2W2 641 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PCDHB3Q9Y5E6 796 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 WDFY3Q8IZQ1 3526 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 SDK2Q58EX2 2172 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CCDC187A0A096LP49 1063 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PRSS51A0A1B0GVH4 220 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 A0A1W2PRB8 838 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 BBIP1A8MTZ0 92 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FXYD1O00168 92 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GYG2O15488 501 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PDPK1O15530 556 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TBX19O60806 448 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 JMJD7P0C870 316 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MAOAP21397 527 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PTPN4P29074 926 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TLX1P31314 330 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 RPL3P39023 403 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GSTM5P46439 218 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 XKP51811 444 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PCBP4P57723 403 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 HBA1P69905 142 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FOLH1Q04609 750 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ABHD18Q0P651 414 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 HSPB3Q12988 150 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DSG2Q14126 1118 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 SELPLGQ14242 412 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DPY19L1Q2PZI1 675 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 NKAIN1Q4KMZ8 207 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DCAF12Q5T6F0 453 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MFSD4BQ5TF39 518 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM69BQ5VUD6 431 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 YOD1Q5VVQ6 348 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 YTHDF3Q7Z739 585 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DHDDSQ86SQ9 333 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 LAPTM4BQ86VI4 370 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MSRB3Q8IXL7 192 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DEFB107AQ8IZN7 70 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 AMER2Q8N7J2 671 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 OR4A15Q8NGL6 344 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 STARD8Q92502 1023 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ANKRD9Q96BM1 317 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PPWD1Q96BP3 646 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 AURKBQ96GD4 344 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ITCHQ96J02 903 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF681Q96N22 645 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 BBS4Q96RK4 519 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 BTBD10Q9BSF8 475 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ULBP3Q9BZM4 244 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TRIM4Q9C037 500 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 GLIPR2Q9H4G4 154 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 WDR41Q9HAD4 459 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM120CQ9NX05 1096 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MS4A12Q9NXJ0 267 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TAS2R7Q9NYW3 318 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC25A37Q9NYZ2 338 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 VAPAQ9P0L0 249 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CDC14AQ9UNH5 594 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 SRPK3Q9UPE1 567 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MAPRE3Q9UPY8 281 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 NEUROG3Q9Y4Z2 214 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PCDHB14Q9Y5E9 798 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DYTNA2CJ06 578 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 C9orf172C9J069 976 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 MEN1O00255 615 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 CNOT3O75175 753 aaKnown RBP9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 ATP5HO75947 161 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 SORBS2O94875 1100 aaKnown RBP9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 FHP07954 510 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 KRT16P08779 473 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 PTPN6P29350 595 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 PPP2R1BP30154 601 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 RORAP35398 523 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 CDK9P50750 372 aaKnown RBP9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 MNAT1P51948 309 aa9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 NCBP2P52298 156 aaKnown RBP eCLIP9.15□□□□□ -0.953e-6■□□□□ 9.3
SNRNP40-201ENST00000263694 MANFP55145 182 aaKnown RBP9.15□□□□□ -0.95
SNRNP40-201ENST00000263694 CASP9P55211 416 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms