RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 ZNF750Q32MQ0 723 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 PRSS41Q7RTY9 318 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 ARHGEF39Q8N4T4 335 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 ZNF655Q8N720 491 aaPredicted RBP16.31■□□□□ 0.2
PCCB-201ENST00000251654 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
PCCB-201ENST00000251654 BBS4Q96RK4 519 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 MAP3K3Q99759 626 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 C9orf16Q9BUW7 83 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 PHF11Q9UIL8 331 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 AP4B1Q9Y6B7 739 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 TMEM229AB2RXF0 380 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 B3GALT2O43825 422 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 CTSBP07858 339 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 CCT3P49368 545 aaKnown RBP16.31■□□□□ 0.2
PCCB-201ENST00000251654 C6orf132Q5T0Z8 1188 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 EIF3MQ7L2H7 374 aaKnown RBP16.31■□□□□ 0.2
PCCB-201ENST00000251654 MAML2Q8IZL2 1156 aaPredicted RBP16.31■□□□□ 0.2
PCCB-201ENST00000251654 ZFP28Q8NHY6 868 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 VPS50Q96JG6 964 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 DNAJB9Q9UBS3 223 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 RPS6KA6Q9UK32 745 aa16.31■□□□□ 0.2
PCCB-201ENST00000251654 SPTBP11277 2137 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 DLGAP1O14490 977 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 DENRO43583 198 aaKnown RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 KIF1CO43896 1103 aaKnown RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 RASAL1O95294 804 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 ARAFP10398 606 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 ZNF10P21506 573 aaPredicted RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 PTGER1P34995 402 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 BUD31P41223 144 aaPredicted RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 DHPSP49366 369 aaPredicted RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 PRIM2P49643 509 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 DSTNP60981 165 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 CDK6Q00534 326 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 BNIP3Q12983 259 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 MED21Q13503 144 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 COL9A2Q14055 689 aaPredicted RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 SCARB2Q14108 478 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 SHBQ15464 509 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 ZNF630Q2M218 657 aaPredicted RBP16.3■□□□□ 0.2
PCCB-201ENST00000251654 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCCB-201ENST00000251654 CEACAM20Q6UY09 585 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 FAM92BQ6ZTR7 304 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 C6orf120Q7Z4R8 191 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 VTCN1Q7Z7D3 282 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 HORMAD2Q8N7B1 307 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 NFKBIDQ8NI38 313 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 EDAQ92838 391 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 CSF3RQ99062 836 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 CCDC3Q9BQI4 270 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 SERHL2Q9H4I8 314 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 IL1RAPQ9NPH3 570 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 STARD5Q9NSY2 213 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 PADI4Q9UM07 663 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 ENTPD4Q9Y227 616 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 SLC22A7Q9Y694 548 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 CSNK1G3Q9Y6M4 447 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 RNF215Q9Y6U7 377 aa16.3■□□□□ 0.2
PCCB-201ENST00000251654 ZNF860A6NHJ4 632 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 EI24O14681 340 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 GALR3O60755 368 aaPredicted RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 CST1P01037 141 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 C8orf89P0DMQ9 161 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 FEN1P39748 380 aaKnown RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 EPHA4P54764 986 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 GFERP55789 205 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 PCBP3P57721 371 aaKnown RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 OLR1P78380 273 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 SPDYE7PQ495Y7 208 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 C6orf52Q5T4I8 152 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 TMEM64Q6YI46 380 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 CCDC80Q76M96 950 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 GAB3Q8WWW8 586 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 GATA6Q92908 595 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 TMBIM1Q969X1 311 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 HSH2DQ96JZ2 352 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 NR1H4Q96RI1 486 aaPredicted RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 RAB33BQ9H082 229 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 LYRM4Q9HD34 91 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 C8orf4Q9NR00 106 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 ZSCAN32Q9NX65 697 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 SCN2AQ99250 2005 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 TXNDC9O14530 226 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 LAMTOR5O43504 91 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 ALPPL2P10696 532 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 ZNF23P17027 643 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 CSNK2A2P19784 350 aaPredicted RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 CPN2P22792 545 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 GPC1P35052 558 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 RXRGP48443 463 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 TP53BP2Q13625 1128 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 CYBRD1Q53TN4 286 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 TNFAIP8L2Q6P589 184 aaPredicted RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 MCATQ8IVS2 390 aaKnown RBP16.29■□□□□ 0.2
PCCB-201ENST00000251654 SLC35F3Q8IY50 421 aa16.29■□□□□ 0.2
PCCB-201ENST00000251654 CCDC116Q8IYX3 515 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms