RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LRRC70Q7Z2Q7 622 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 GALNT11Q8NCW6 608 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 LHFPL5Q8TAF8 219 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF431Q8TF32 576 aaPredicted RBP16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 TSSK6Q9BXA6 273 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 BTNL2Q9UIR0 455 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 RPL36Q9Y3U8 105 aaKnown RBP16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 CDH10Q9Y6N8 788 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 DSPPQ9NZW4 1301 aa16.86■□□□□ 0.29
CDKN1B-201ENST00000228872 FAM227AF5H4B4 570 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 F5H5T6 163 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 GAPDHSO14556 408 aaPredicted RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 EFEMP2O95967 443 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 ETFAP13804 333 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 CPEP16870 476 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 ATF6P18850 670 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 RPIAP49247 311 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 CAV3P56539 151 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 SNTA1Q13424 505 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 SF1Q15637 639 aaKnown RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 BCDIN3DQ7Z5W3 292 aaKnown RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 COMMD7Q86VX2 200 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 OR52P1PQ8NH57 321 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 RHCGQ9UBD6 479 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 RABL2AQ9UBK7 228 aaPredicted RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 KIAA0355O15063 1070 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 SCAMP2O15127 329 aaKnown RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 POU4F3Q15319 338 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF770Q6IQ21 691 aaPredicted RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 ANGPTL8Q6UXH0 198 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 NPAS3Q8IXF0 933 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 GEMIN6Q8WXD5 167 aaKnown RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 KCNJ15Q99712 375 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 KCNN2Q9H2S1 579 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 CWH43Q9H720 699 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 MRPL39Q9NYK5 338 aaKnown RBP16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 ALPK3Q96L96 1907 aa16.85■□□□□ 0.29
CDKN1B-201ENST00000228872 PRAMEF33A0A0G2JMD5 474 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ARRDC5A6NEK1 342 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 PRR23AA6NEV1 266 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 A8MUA0 341 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ISM1B1AKI9 464 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 HPGDSO60760 199 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 PRAMEF10O60809 474 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 RAF1P04049 648 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 TPOP07202 933 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 AGFG1P52594 562 aaKnown RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 MVDP53602 400 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 C21orf58P58505 322 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 RPS25P62851 125 aaKnown RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 SCARB2Q14108 478 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 IL18Q14116 193 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 FCN2Q15485 313 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 KLHL22Q53GT1 634 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 CDH24Q86UP0 819 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 KIF18BQ86Y91 864 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 NFKBIDQ8NI38 313 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 PIGUQ9H490 435 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ASB8Q9H765 288 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 HEXA-AS1Q9H8Q6 139 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 LIN7BQ9HAP6 207 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 GPATCH2Q9NW75 528 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 AFF4Q9UHB7 1163 aaKnown RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 FBXO9Q9UK97 447 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 MGAT4AQ9UM21 535 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ING4Q9UNL4 249 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 SERTM1A2A2V5 107 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 GABRR3A8MPY1 467 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 H7C4K7 107 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 QSOX1O00391 747 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 LHCGRP22888 699 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 IL32P24001 234 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 AANATQ16613 207 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 METAP1DQ6UB28 335 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF852Q6ZMS4 543 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF366Q8N895 744 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 DTX3Q8N9I9 347 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 TMEM163Q8TC26 289 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 BCL7CQ8WUZ0 217 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 CREB3L1Q96BA8 519 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 SPIN1Q9Y657 262 aaPredicted RBP16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 ENPP4Q9Y6X5 453 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
CDKN1B-201ENST00000228872 CHP2O43745 196 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 SOX14O95416 240 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 SLC6A4P31645 630 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 HMGCLP35914 325 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 INPP1P49441 399 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 RBBP4Q09028 425 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 ELOAQ14241 798 aaKnown RBP16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 ATAT1Q5SQI0 421 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 GCNT6Q5T4J0 391 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 CPTPQ5TA50 214 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 PLEKHM3Q6ZWE6 761 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 TMEM173Q86WV6 379 aaPredicted RBP16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 OR4A15Q8NGL6 344 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms