RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 ZXDCQ2QGD7 858 aaPredicted RBP13.44□□□□□ -0.26
SF1-201ENST00000227503 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 BRAT1Q6PJG6 821 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 SHFQ7M4L6 423 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 SYNPOQ8N3V7 929 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 ZNF366Q8N895 744 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 OR4C15Q8NGM1 316 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.44□□□□□ -0.261e-8■□□□□ 10.2
SF1-201ENST00000227503 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 STOML2Q9UJZ1 356 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 MAPRE3Q9UPY8 281 aa13.44□□□□□ -0.26
SF1-201ENST00000227503 LINC00862A6NCI5 91 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 TOXO94900 526 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 FAM157BP0CG42 384 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CXCL3P19876 107 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 OR1D2P34982 312 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CLDN20P56880 219 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 HKDC1Q2TB90 917 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 ATAT1Q5SQI0 421 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 WFDC5Q8TCV5 224 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 MARC2Q969Z3 335 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 TESCQ96BS2 214 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 METTL2AQ96IZ6 378 aaKnown RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 TM6SF2Q9BZW4 377 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 RDH14Q9HBH5 336 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 PAK6Q9NQU5 681 aaPredicted RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 PRRG1O14668 218 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CA12O43570 354 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 LANCL1O43813 399 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 SCN2BO60939 215 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CLDN9O95484 217 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 PAHP00439 452 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 IL32P24001 234 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 AP1S1P61966 158 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 RBBP4Q09028 425 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 EXOSC2Q13868 293 aaKnown RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 RNASE12Q5GAN4 147 aaKnown RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 NOXRED1Q6NXP6 359 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 FAM180BQ6P0A1 224 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 MACC1Q6ZN28 852 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 CPA6Q8N4T0 437 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 SKA2Q8WVK7 121 aaPredicted RBP13.43□□□□□ -0.26
SF1-201ENST00000227503 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 SPNS1Q9H2V7 528 aa13.43□□□□□ -0.26
SF1-201ENST00000227503 SLC9A3R1O14745 358 aaPredicted RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 KPNA5O15131 536 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 CLDN7O95471 211 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TRBC1P01850 177 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 PRKAR1AP10644 381 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 BPIP17213 487 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ITGALP20701 1170 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ITPKAP23677 461 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 CD79BP40259 229 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 CSKP41240 450 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 RPL6Q02878 288 aaKnown RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 CRTC2Q53ET0 693 aaPredicted RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 TMEM81Q6P7N7 255 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 LAS2Q8IYD9 372 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ADGRG2Q8IZP9 1017 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 OR11H7Q8NGC8 314 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SIPA1Q96FS4 1042 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 MTERF1Q99551 399 aaKnown RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 PKP4Q99569 1192 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 HEXA-AS1Q9H8Q6 139 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 BEX1Q9HBH7 125 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 NDUFB11Q9NX14 153 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 H3BN98 237 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 DVL2O14641 736 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SMAD6O43541 496 aaKnown RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 CHP2O43745 196 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 PRAMEF4O60810 478 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 MPC2O95563 127 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 C1SP09871 688 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ANXA8P13928 327 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 HNF1BP35680 557 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ZNF81P51508 661 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 PTPN5P54829 565 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TEKQ02763 1124 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 GRM7Q14831 915 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 CHRNA6Q15825 494 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 PRAMEF9Q5VWM5 478 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 MEX3DQ86XN8 651 aaKnown RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TCEANCQ8N8B7 351 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 BEST4Q8NFU0 473 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 LHFPL5Q8TAF8 219 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SLC29A3Q9BZD2 475 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms