RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ACTR10Q9NZ32 417 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 NUP98P52948 1817 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 A0A0X1KG70 313 aa17.64■□□□□ 0.42
CLIP2-201ENST00000223398 ECHS1P30084 290 aa17.64■□□□□ 0.42
CLIP2-201ENST00000223398 TSTQ16762 297 aaKnown RBP17.64■□□□□ 0.42
CLIP2-201ENST00000223398 GNPDA2Q8TDQ7 276 aa17.64■□□□□ 0.42
CLIP2-201ENST00000223398 TRIM36Q9NQ86 728 aa17.64■□□□□ 0.42
CLIP2-201ENST00000223398 TMEM5Q9Y2B1 443 aa17.64■□□□□ 0.42
CLIP2-201ENST00000223398 TIMP2P16035 220 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 HLA-FP30511 346 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 RORCP51449 518 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 SLC7A9P82251 487 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 RANBP10Q6VN20 620 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 LARP4Q71RC2 724 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLIP2-201ENST00000223398 HAVCR1Q96D42 359 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 HCN4Q9Y3Q4 1203 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 GPR39O43194 453 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ZXDBP98169 803 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CDK3Q00526 305 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF551Q7Z340 670 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CXCL16Q9H2A7 254 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ANKRA2Q9H9E1 313 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 TIGARQ9NQ88 270 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 APOL3O95236 402 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CERS1P27544 350 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ACY1Q03154 408 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 SHHQ15465 462 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ABHD17BQ5VST6 288 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CPXM2Q8N436 756 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 OR51G2Q8NGK0 314 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 PIK3R3Q92569 461 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 KCTD7Q96MP8 289 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 PELOQ9BRX2 385 aaKnown RBP17.64■□□□□ 0.41
CLIP2-201ENST00000223398 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 SIT1Q9Y3P8 196 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 PEX16Q9Y5Y5 336 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 A0A096LPI6 279 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 SOX30O94993 753 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 HSD3B1P14060 373 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 HSD3B2P26439 372 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CDH15P55291 814 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CES4AQ5XG92 561 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 TMPPEQ6ZT21 453 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 CLECL1Q8IZS7 167 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 EID2Q8N6I1 236 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 OR14L1PQ8NHC6 308 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 FCGR1BQ92637 280 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 FUBP1Q96AE4 644 aaKnown RBP17.64■□□□□ 0.41
CLIP2-201ENST00000223398 LRRC46Q96FV0 321 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 RADILQ96JH8 1075 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF451Q9Y4E5 1061 aa17.64■□□□□ 0.41
CLIP2-201ENST00000223398 NWD2Q9ULI1 1742 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 A0A0A6YYC8 382 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 A8MVJ9 347 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 I3L1I5 382 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 TYROBPO43914 113 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 H6PDO95479 791 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 CEBPGP53567 150 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SWI5Q1ZZU3 235 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SPIN3Q5JUX0 258 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 DPPA4Q7L190 304 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 KLHDC9Q8NEP7 349 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 NSMAFQ92636 917 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 OSTF1Q92882 214 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 HPS1Q92902 700 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 BARD1Q99728 777 aaKnown RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SRA1Q9HD15 236 aaKnown RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 TM9SF3Q9HD45 589 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 HPF1Q9NWY4 346 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 IL17CQ9P0M4 197 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 LOC100509620A0A075B734 347 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 LINC01553A4QN01 128 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 H3BNX3 289 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SGK494L7N484 410 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SOCS2O14508 198 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 ITGBL1O95965 494 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 ENTPD1P49961 510 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 LIN52Q52LA3 116 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 PRR22Q8IZ63 422 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 FAM129BQ96TA1 746 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 TBX10O75333 385 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF888P0CJ79 500 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF84P51523 738 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 FOXK1P85037 733 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 GSTM4Q03013 218 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 CRYZQ08257 329 aaKnown RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 GINS1Q14691 196 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 NDUFAF5Q5TEU4 345 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 RAB43Q86YS6 212 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SLC9B1P1A6NJY1 282 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 PGCP20142 388 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 CD38P28907 300 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 SCGB2B2Q4G0G5 96 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 PNCKQ6P2M8 343 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 ASB18Q6ZVZ8 466 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 USP43Q70EL4 1123 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 CREB3L4Q8TEY5 395 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 DNAJA4Q8WW22 397 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 TRMT2BQ96GJ1 504 aaKnown RBP17.63■□□□□ 0.41
CLIP2-201ENST00000223398 VNN3Q9NY84 501 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms