RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SLC38A5Q8WUX1 472 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GAB3Q8WWW8 586 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 LCN9Q8WX39 176 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SLC35C2Q9NQQ7 365 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SIRT3Q9NTG7 399 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ZCCHC3Q9NUD5 404 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 IMPAD1Q9NX62 359 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CLDND1Q9NY35 253 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TAS2R7Q9NYW3 318 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CLEC1BQ9P126 229 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TRPC4Q9UBN4 977 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SEC14L3Q9UDX4 400 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SNX7Q9UNH6 387 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PCDHGB1Q9Y5G3 927 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PCDHGA2Q9Y5H1 932 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MYO10Q9HD67 2058 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ARRDC5A6NEK1 342 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 J3KTA2 159 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ZW10O43264 779 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ERAL1O75616 437 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FADS2O95864 444 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 STATHP02808 62 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PCMT1P22061 227 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 HNRNPA2B1P22626 353 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 EPHA2P29317 976 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 GGT2P36268 569 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ACTR1BP42025 376 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 MAGEA8P43361 318 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 IDH2P48735 452 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ACTR1AP61163 376 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 MRPS21P82921 87 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 RGS1Q08116 209 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SLAMF1Q13291 335 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 GNA13Q14344 377 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ZIC1Q15915 447 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FGD3Q5JSP0 725 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 COLEC12Q5KU26 742 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF793Q6ZN11 406 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FAM92BQ6ZTR7 304 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 RD3Q7Z3Z2 195 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TSEN54Q7Z6J9 526 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FAM20CQ8IXL6 584 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FBXL6Q8N531 539 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 MFSD9Q8NBP5 474 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 OR9Q2Q8NGE9 314 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 OR8K5Q8NH50 307 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PSMA8Q8TAA3 256 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SFXN5Q8TD22 340 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 RAB8BQ92930 207 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SLC22A18Q96BI1 424 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 MS4A6EQ96DS6 147 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 AMDHD1Q96NU7 426 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 NECTIN4Q96NY8 510 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 BCL7BQ9BQE9 202 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 DUSP21Q9H596 190 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 GPN2Q9H9Y4 310 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ENPP5Q9UJA9 477 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PSME2Q9UL46 239 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TMCC3Q9ULS5 477 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 HCN4Q9Y3Q4 1203 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PCDHGA6Q9Y5G7 932 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PCDHGA4Q9Y5G9 962 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PIAS3Q9Y6X2 628 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 F5P12259 2224 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 POM121BA6NF01 834 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 LRRC72A6NJI9 287 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ANHXE9PGG2 379 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 HMGN4O00479 90 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PRICKLE3O43900 615 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 INMTO95050 263 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 CHRM5P08912 532 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 NR2F1P10589 423 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PSMB9P28065 219 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PEBP1P30086 187 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PXNP49023 591 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 CRISP3P54108 245 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 CLDN2P57739 230 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 RPS15AP62244 130 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 EMX1Q04741 257 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ADPRMQ3LIE5 342 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 EOGTQ5NDL2 527 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ABHD17CQ6PCB6 329 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TMEM64Q6YI46 380 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 AHSA2Q719I0 299 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PRSS48Q7RTY5 328 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TRIM69Q86WT6 500 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 CROCCP3Q8IVE0 287 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ENTHD1Q8IYW4 607 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ACOT4Q8N9L9 421 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 UTP15Q8TED0 518 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FAR1Q8WVX9 515 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 OR1E3Q8WZA6 343 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 MOAP1Q96BY2 351 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ALPK1Q96QP1 1244 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 PSD2Q9BQI7 771 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SPATA5L1Q9BVQ7 753 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms