RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Tnfrsf22Q9ER62 198 aa18.8■□□□□ 0.6
Lig3-204ENSMUST00000131537 VapaQ9WV55 249 aaKnown RBP18.8■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ptdss2Q9Z1X2 473 aa18.8■□□□□ 0.6
Lig3-204ENSMUST00000131537 Lgr4A2ARI4 951 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Znf382B2RXC5 579 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Itga10E9Q6R1 1167 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Zfp597E9Q6S0 419 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gm3248K7N721 186 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Aff2O55112 1272 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Mc3rP33033 323 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 ThpoP40226 356 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Stx1bP61264 288 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Acss3Q14DH7 682 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Slc39a12Q5FWH7 689 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Itga2Q62469 1178 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ptk6Q64434 451 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Tas2r40Q7TQB8 319 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Tprg1Q8CB49 279 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ttc23Q8CHY7 488 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 OoepQ9CWE6 164 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Sugt1Q9CX34 336 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Prl8a8Q9DAS4 241 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ccdc22Q9JIG7 627 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 MeltfQ9R0R1 738 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Kmt2bO08550 2713 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gvin1Q80SU7 2427 aa18.79■□□□□ 0.6
Lig3-204ENSMUST00000131537 Vmn1r3A2AMT7 306 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gm3298E9PW80 205 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Slc6a18O88576 615 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cox5bP19536 128 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ica1P97411 478 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Tmem64Q3U145 381 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cdk15Q3V3A1 433 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Clec4b1Q7TS58 209 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Rims3Q80U57 307 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Q810N5 247 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Rcn2Q8BP92 320 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ankmy1Q8C0W1 906 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cabcoco1Q8CDT7 208 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 St8sia6Q8K4T1 398 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Vmn1r79Q8R285 306 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Abhd4Q8VD66 342 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Dda1Q9D9Z5 102 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 5430401F13RikE9Q328 175 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Vmn2r105E9Q3A5 860 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cyp1a2P00186 513 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Nkx2-6P43688 289 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 RoraP51448 523 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Tra2bP62996 288 aaKnown RBP18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Rcn1Q05186 325 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 B4galnt2Q09199 510 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Eif1adQ3THJ3 170 aaKnown RBP18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 1700012B07RikQ3V0S8 276 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gm14851Q5ERJ0 116 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Olfr140Q60878 302 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Kir3dl2Q673W2 388 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Lrrc75bQ7TPD7 306 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cdcp2Q8BQH6 427 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 SowahcQ8C0J6 512 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Krtcap3Q8K177 240 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Nkain1Q9D035 207 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Skp1Q9WTX5 163 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 Eif2s3yQ9Z0N2 472 aa18.78■□□□□ 0.6
Lig3-204ENSMUST00000131537 BptfA2A654 3036 aaKnown RBP18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gm28168A0A087WNP1 180 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Cd300ld2A2A7W0 305 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Ighg2cF6TQW2 404 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Bcl2a1dO55179 172 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Rdh5O55240 318 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 P01864 335 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Zp2P20239 713 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 MatkP41242 505 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Mnat1P51949 309 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Atp6v1b2P62814 511 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Csn1s2aQ02862 184 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 TchpQ3TVW5 497 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Thoc5Q8BKT7 683 aaKnown RBP18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Acsm2Q8K0L3 575 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Abcf3Q8K268 709 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Mcoln3Q8R4F0 553 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Slc25a36Q922G0 311 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Tnfsf13Q9D777 241 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Chp2Q9D869 196 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Pbld1Q9DCG6 288 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Lima1Q9ERG0 753 aaKnown RBP18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Slamf1Q9QUM4 343 aa18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 HnrnpfQ9Z2X1 415 aaKnown RBP18.77■□□□□ 0.6
Lig3-204ENSMUST00000131537 Gm6880A3KG45 208 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Apba1B2RUJ5 842 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 RerglB2RVE2 204 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Fpr-s1O08790 351 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Dhcr7O88455 471 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Irx2P81066 474 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 S100a13P97352 98 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Slc30a3P97441 388 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 InhaQ04997 366 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Grid2ipQ0QWG9 1203 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Mapkapk3Q3UMW7 384 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Klf4Q60793 483 aa18.76■□□□□ 0.59
Lig3-204ENSMUST00000131537 Cyp4b1Q64462 511 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms