RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Unc5aQ8K1S4 898 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Coq9Q8K1Z0 313 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tm6sf2Q8R1J1 378 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mgat2Q921V5 442 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Uck2Q99PM9 261 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 L3hypdhQ9CXA2 354 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dhrs7Q9CXR1 338 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kiaa0141Q9DCV6 510 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ehd1Q9WVK4 534 aaKnown RBP11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 5430401F13RikE9Q328 175 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm21319F6YNI8 144 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kbtbd2G3X9X1 623 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tspan6O70401 245 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cops4O88544 406 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 TrhrP21761 393 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Il1r2P27931 410 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 UradQ283N4 178 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Uap1l1Q3TW96 507 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc22a15Q504N2 544 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pum2Q80U58 1066 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Krr1Q8BGA5 380 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc15a3Q8BPX9 578 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Asb6Q91ZU1 418 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Trmt5Q9D0C4 501 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 AgtrapQ9WVK0 161 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 NcdnQ9Z0E0 729 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm14862B1AV28 81 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cdh5P55284 784 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rps26P62855 115 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pydc3Q3V3Q4 588 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cdh7Q8BM92 785 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc41a2Q8BYR8 573 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmem150bQ8R218 238 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cdc42ep1Q91W92 409 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Acsl6Q91WC3 697 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Prmt1Q9JIF0 371 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Hapln1Q9QUP5 356 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1056A2AVY0 313 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Hps1O08983 704 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gstm6O35660 218 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nme6O88425 189 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 F2rl3O88634 396 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Htr7P32304 448 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Muc19Q6JHY2 733 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cachd1Q6PDJ1 1288 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Piwil2Q8CDG1 971 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc22a6Q8VC69 545 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dctn2Q99KJ8 402 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fam13cQ9DBR2 601 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nek6Q9ES70 313 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ect2lA0A140LIP2 953 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm10479K7N6H4 105 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Chrm4P32211 479 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Taf1aP97357 453 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ankub1Q3UUE9 192 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cdv3Q4VAA2 281 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Prr11Q8BHE0 368 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zc3h14Q8BJ05 735 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc35e2Q8C811 405 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cfap61Q8CEL2 1252 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Faim2Q8K097 317 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Med17Q8VCD5 649 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Stk19Q9JHN8 254 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gabrb3P63080 473 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tbx5P70326 518 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Hspb6Q5EBG6 162 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Galk2Q68FH4 458 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pcdhga7Q6DD96 935 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ranbp10Q6VN19 620 aaKnown RBP11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Amigo2Q80ZD9 519 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dpep2Q8C255 478 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 SuoxQ8R086 546 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Sh3bp4Q921I6 962 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Clec2gQ9D676 269 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Prkar1aQ9DBC7 381 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Clec3aQ9EPW4 196 aa11.37□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1375A0A0N4SUP0 313 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dnmt3cP0DOY1 709 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 PlaaP27612 794 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Il1rapQ61730 570 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 NagpaQ8BJ48 517 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gpr26Q8BZA7 337 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc38a4Q8R1S9 547 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr692Q8VF03 329 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olig2Q9EQW6 323 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ehd3Q9QXY6 535 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 SqorQ9R112 450 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr605E9Q838 314 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm21876F6XK35 94 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn1r86L7N213 316 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Grik2P39087 908 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rph3aP47708 681 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc37a3Q3TIT8 494 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmbim1Q8BJZ3 309 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mrps35Q8BJZ4 320 aaKnown RBP11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tbc1d17Q8BYH7 645 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slco4a1Q8K078 723 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr109Q8VG96 314 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Klhl22Q99JN2 634 aa11.36□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cep97Q9CZ62 856 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms