RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Twist2Q9D030 160 aa20.22■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Fam122cQ9D5J5 180 aa20.22■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Padi4Q9Z183 666 aa20.22■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Arid1aA2BH40 2283 aaKnown RBP20.22■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Plch1Q4KWH5 1682 aa20.22■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Lrrc31F6VYM1 502 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Ckmt2Q6P8J7 419 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Sec16bQ91XT4 1051 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 NaxdQ9CZ42 343 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 GrifinQ9D1U0 144 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Pdzk1Q9JIL4 519 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Scarb2O35114 478 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Msto1Q2YDW2 556 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Tgm6Q8BM11 706 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Gm4922Q8C0N0 497 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Ppwd1Q8CEC6 646 aaKnown RBP20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Mthfd1Q922D8 935 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Atoh8Q99NA2 322 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Matn1P51942 500 aaKnown RBP20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Cdkn2bP55271 130 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Eef1a2P62631 463 aaKnown RBP20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 GcgrQ61606 485 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Abhd13Q80UX8 337 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Amigo1Q80ZD8 492 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Psmf1Q8BHL8 271 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Olfr1469Q8VFW5 309 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Zfp810Q99K45 461 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Akirin1Q99LF1 191 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Otud4B2RRE7 1107 aaKnown RBP20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Rhox6O70238 227 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Phf21bQ8C966 487 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Fundc2Q9D6K8 151 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Kiaa0141Q9DCV6 510 aa20.21■□□□□ 0.83
Nckap1-201ENSMUST00000028386 Klf1P46099 358 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gal3st3P61315 431 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Il11ra2P70225 432 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gpat2Q14DK4 801 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Mon1bQ8BMQ8 553 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Laptm4bQ91XQ6 227 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Avpr1bQ9WU02 421 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gm266A6H634 200 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Il1r2P27931 410 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 DglucyQ8BH86 617 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Cdt1Q8R4E9 557 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Commd4Q9CQ02 199 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Med8Q9D7W5 268 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gm8159E9Q0R1 267 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Apobec1P51908 229 aaKnown RBP20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Olfr12Q60894 333 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Amer3Q6NS69 780 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 FcrlaQ920A9 352 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Klhl22Q99JN2 634 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Epb41l4bQ9JMC8 527 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Cacna1aP97445 2368 aa20.2■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gm21497A0A087WRK3 222 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 1700028J19RikA0A0U1RP08 172 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Vmn2r110E9PWD5 858 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Zfp758E9QAA1 583 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Kcnj12P52187 427 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Tstd2Q3U269 495 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Fut10Q5F2L2 481 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Pcbp2Q61990 362 aaKnown RBP20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Olfr1197Q7TR13 314 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Olfr1196Q7TR14 314 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Clec18aQ7TSQ1 534 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Cacul1Q8R0X2 377 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Pole4Q9CQ36 118 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 ClpxQ9JHS4 634 aaKnown RBP20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Plscr1Q9JJ00 328 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 RhagQ9QUT0 438 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Fem1aaQ9Z2G1 654 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 UgdhO70475 493 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Hcn3O88705 779 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 P01810 119 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 TtlP38585 377 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Ikzf2P81183 526 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Cpa6Q5U901 438 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Ranbp10Q6VN19 620 aaKnown RBP20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Lancl3Q8CD19 420 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Nipal2Q91WC7 383 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Tbc1d20Q9D9I4 402 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Scn1aA2APX8 2009 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Olfr675A0A1B0GSE1 317 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Dgcr6O35347 198 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Ccrl2O35457 360 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Kcnc1P15388 511 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Bcl6P41183 707 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Slc16a3P57787 470 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Rps17P63276 135 aaKnown RBP20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Dppa5bP85965 119 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 ManeaQ6NXH2 462 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 9130023H24RikQ8BG98 337 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gpn2Q8VEJ1 310 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Gnpda2Q9CRC9 276 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Wdr61Q9ERF3 305 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Rcan2Q9JHG2 197 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 TprF6ZDS4 2431 aaKnown RBP20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Ttll2A4Q9E4 540 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Olfr172E9Q8F6 309 aa20.19■□□□□ 0.82
Nckap1-201ENSMUST00000028386 Cd14P10810 366 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms