RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MS4A12Q9NXJ0 267 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 VPS29Q9UBQ0 182 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 PHF11Q9UIL8 331 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 G3BP2Q9UN86 482 aaKnown RBP24.97■■□□□ 1.59
VEGFA-231ENST00000640499 ACTL7BQ9Y614 415 aa24.97■■□□□ 1.59
VEGFA-231ENST00000640499 CPAMD8Q8IZJ3 1885 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 GPR143P51810 404 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 RAE1P78406 368 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 CASP8Q14790 479 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 EXT1Q16394 746 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 JMJD6Q6NYC1 403 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 CYP20A1Q6UW02 462 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 ISLR2Q6UXK2 745 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 LINC00696Q6ZRV3 163 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 CROCCP2Q86T23 111 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 C1orf52Q8N6N3 182 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 Q8NA96 180 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 C11orf24Q96F05 449 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 APIPQ96GX9 242 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 LMF1Q96S06 567 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 ALOXE3Q9BYJ1 711 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 RPF2Q9H7B2 306 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 PNO1Q9NRX1 252 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 LYARQ9NX58 379 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 AHSPQ9NZD4 102 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 VTI1BQ9UEU0 232 aa24.96■■□□□ 1.59
VEGFA-231ENST00000640499 PPIEQ9UNP9 301 aaKnown RBP24.96■■□□□ 1.59
VEGFA-231ENST00000640499 PGRMC2O15173 223 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 MAN1A2O60476 641 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 NPHS1O60500 1241 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 AIFM1O95831 613 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 ALPPP05187 535 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 DHRS4L1P0CG22 281 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 ZNF33BQ06732 778 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 MFAP5Q13361 173 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 ARL13AQ5H913 290 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-231ENST00000640499 CRB2Q5IJ48 1285 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 CLEC6AQ6EIG7 209 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 CUZD1Q86UP6 607 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 TEX19Q8NA77 164 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 PTPMT1Q8WUK0 201 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-231ENST00000640499 TMBIM4Q9HC24 238 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 ANAPC2Q9UJX6 822 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 CCL27Q9Y4X3 112 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 SPACA6W5XKT8 324 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 CNTRLQ7Z7A1 2325 aa24.95■■□□□ 1.58
VEGFA-231ENST00000640499 BLACEA4D250 179 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 GLOD5A6NK44 160 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 H3BQF6 201 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 KLHL41O60662 606 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 DPM1O60762 260 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 MYO1DO94832 1006 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 SERPINB4P48594 390 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 CCNYL2Q5T2Q4 361 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 IRAK1BP1Q5VVH5 260 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 FCRLBQ6BAA4 426 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 DGAT2L6Q6ZPD8 337 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 TRIM46Q7Z4K8 759 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 HPS6Q86YV9 775 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 GBP7Q8N8V2 638 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-231ENST00000640499 APCDD1LQ8NCL9 501 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 TANKQ92844 425 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 TM4SF18Q96CE8 201 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 PKNOX2Q96KN3 472 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 TRMOQ9BU70 441 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 TUBB1Q9H4B7 451 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 ZNF223Q9UK11 482 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-231ENST00000640499 PTGDR2Q9Y5Y4 395 aa24.94■■□□□ 1.58
VEGFA-231ENST00000640499 A0A1W2PS29 197 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 CASRP41180 1078 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 FOLH1Q04609 750 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 UGT3A2Q3SY77 523 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 PLEKHN1Q494U1 663 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-231ENST00000640499 SLC6A19Q695T7 634 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 MMP21Q8N119 569 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 DNAJB14Q8TBM8 379 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 TLCD1Q96CP7 247 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 KCNK13Q9HB14 408 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 ADAP2Q9NPF8 381 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 PLA2G3Q9NZ20 509 aa24.93■■□□□ 1.58
VEGFA-231ENST00000640499 ARHGAP10A1A4S6 786 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 A8MUI8 341 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 NR2F6P10588 404 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 UROSP10746 265 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 H2AFXP16104 143 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-231ENST00000640499 ASPHQ12797 758 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 STX4Q12846 297 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 TERF2Q15554 542 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 Q6ZS92 163 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 PAGE2Q7Z2X7 111 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 CATSPER1Q8NEC5 780 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 EPN3Q9H201 632 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 NMRK1Q9NWW6 199 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 LUZP4Q9P127 313 aa24.92■■□□□ 1.58
VEGFA-231ENST00000640499 TMEM233B4DJY2 109 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 AZIN1O14977 448 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 TM9SF1O15321 606 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 SORBS2O94875 1100 aaKnown RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 FGF4P08620 206 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 MYZAPP0CAP1 466 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms