RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 KRT4P19013 534 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 TAC1P20366 129 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 CA7P43166 264 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 RAB38P57729 211 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 ARG2P78540 354 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 BTG2P78543 158 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 SRSF11Q05519 484 aaKnown RBP17.04■□□□□ 0.32
VPS72-207ENST00000640458 MFAP5Q13361 173 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 SFT2D3Q587I9 215 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 KHDRBS2Q5VWX1 349 aaKnown RBP17.04■□□□□ 0.32
VPS72-207ENST00000640458 PLAG1Q6DJT9 500 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 XKRXQ6PP77 449 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 ADAMTS18Q8TE60 1221 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 ATP6V1E2Q96A05 226 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 ZBTB9Q96C00 473 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 REPS1Q96D71 796 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 SH3GL2Q99962 352 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 COPS7BQ9H9Q2 264 aaPredicted RBP17.04■□□□□ 0.32
VPS72-207ENST00000640458 ZBTB26Q9HCK0 441 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 PRDM9Q9NQV7 894 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 PSD3Q9NYI0 1048 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 DCDC2Q9UHG0 476 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 MMACHCQ9Y4U1 282 aa17.04■□□□□ 0.32
VPS72-207ENST00000640458 IGKV3D-11A0A0A0MRZ8 115 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 A0A1W2PPM1 405 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 C19orf84I3L1E1 186 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 COPEO14579 308 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 CERS1P27544 350 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 SOX11P35716 441 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 CCNG1P51959 295 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 LIM2P55344 173 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 OR4D2P58180 307 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 ACTN3Q08043 901 aaPredicted RBP17.03■□□□□ 0.32
VPS72-207ENST00000640458 CPSF6Q16630 551 aaKnown RBP eCLIP17.03■□□□□ 0.32
VPS72-207ENST00000640458 SH2D5Q6ZV89 423 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 OR52B6Q8NGF0 335 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 BRIX1Q8TDN6 353 aaKnown RBP17.03■□□□□ 0.32
VPS72-207ENST00000640458 ZNF483Q8TF39 744 aaPredicted RBP17.03■□□□□ 0.32
VPS72-207ENST00000640458 NSUN5Q96P11 429 aaKnown RBP17.03■□□□□ 0.32
VPS72-207ENST00000640458 LPAR4Q99677 370 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 OR51B5Q9H339 312 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 PRM3Q9NNZ6 103 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 DMRT3Q9NQL9 472 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 PLA2G3Q9NZ20 509 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 DAPP1Q9UN19 280 aa17.03■□□□□ 0.32
VPS72-207ENST00000640458 SPG11Q96JI7 2443 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 TCRBV16S1A1N1A0A5B0 115 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 GLRA3O75311 464 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 SCELO95171 688 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 NADKO95544 446 aaPredicted RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 ITGAMP11215 1152 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 HIST1H1TP22492 207 aaPredicted RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 ATP5A1P25705 553 aaKnown RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 PTX3P26022 381 aaPredicted RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 ARFIP1P53367 373 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 RPS13P62277 151 aaKnown RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 PHEXP78562 749 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 TRAF3Q13114 568 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 RCN2Q14257 317 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 EXT1Q16394 746 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 PAPD4Q6PIY7 484 aaKnown RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 ZNF793Q6ZN11 406 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 RNF175Q8N4F7 328 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 AMER2Q8N7J2 671 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 ACOT4Q8N9L9 421 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 M1APQ8TC57 530 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 CDK15Q96Q40 435 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 LYRM4Q9HD34 91 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 SEMA4BQ9NPR2 832 aaPredicted RBP17.02■□□□□ 0.32
VPS72-207ENST00000640458 NECTIN3Q9NQS3 549 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 KCMF1Q9P0J7 381 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 PTGFRNQ9P2B2 879 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 SEC14L3Q9UDX4 400 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 GRID1Q9ULK0 1009 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 PPT2Q9UMR5 302 aa17.02■□□□□ 0.32
VPS72-207ENST00000640458 DYTNA2CJ06 578 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 FOXE1O00358 373 aaPredicted RBP17.01■□□□□ 0.31
VPS72-207ENST00000640458 RTCAO00442 366 aaKnown RBP17.01■□□□□ 0.31
VPS72-207ENST00000640458 CYR61O00622 381 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 CLDN4O14493 209 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 DLX3O60479 287 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 SH3BGRLO75368 114 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 MAOAP21397 527 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 ATP5F1P24539 256 aaPredicted RBP17.01■□□□□ 0.31
VPS72-207ENST00000640458 KIR3DL1P43629 444 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 HSD17B7P56937 341 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 MAGOHP61326 146 aaKnown RBP17.01■□□□□ 0.31
VPS72-207ENST00000640458 HERVK_113P63132 956 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 ADORA2A-AS1P86434 159 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 CUL3Q13618 768 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 BTBD16Q32M84 506 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 GGTA1PQ4G0N0 100 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 OR4C11Q6IEV9 310 aa17.01■□□□□ 0.31
VPS72-207ENST00000640458 MILR1Q7Z6M3 343 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms