RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 DEFB126Q9BYW3 111 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 TRIM7Q9C029 511 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ZBP1Q9H171 429 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 NT5DC2Q9H857 520 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF275Q9NSD4 429 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ETV7Q9Y603 341 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ATRXP46100 2492 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 NOTCH2Q04721 2471 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 GRAP2O75791 330 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 APOA4P06727 396 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 KRT3P12035 628 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 SKILP12757 684 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 PPP2R1AP30153 589 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 TIA1P31483 386 aaKnown RBP eCLIP3.38□□□□□ -1.87
CCDC7-216ENST00000640058 NPBWR1P48145 328 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 FKBP1BP68106 108 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 LIPJQ5W064 366 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 CGB2Q6NT52 195 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 SLFN11Q7Z7L1 901 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 CACUL1Q86Y37 369 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 RNF149Q8NC42 400 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 KIAA0895Q8NCT3 520 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-216ENST00000640058 ESAMQ96AP7 390 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 SGF29Q96ES7 293 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 ZBED6CLQ96FA7 236 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-216ENST00000640058 CCM2Q9BSQ5 444 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF665Q9H7R5 613 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF319Q9P2F9 582 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 CLEC4EQ9ULY5 219 aa3.38□□□□□ -1.87
CCDC7-216ENST00000640058 HTR3EA5X5Y0 456 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 E7ENQ6 273 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 E2F3O00716 465 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 CDX4O14627 284 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-216ENST00000640058 MCF2LO15068 1137 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 DUSP11O75319 330 aaKnown RBP3.37□□□□□ -1.87
CCDC7-216ENST00000640058 FHP07954 510 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 GPX3P22352 226 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 FHITP49789 147 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 PSMD6Q15008 389 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 C17orf58Q2M2W7 97 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 C2orf83Q53S99 150 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-216ENST00000640058 SPATA19Q7Z5L4 167 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 RBM18Q96H35 190 aaKnown RBP3.37□□□□□ -1.87
CCDC7-216ENST00000640058 ERGIC2Q96RQ1 377 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 MAPKAP1Q9BPZ7 522 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF446Q9NWS9 450 aa3.37□□□□□ -1.87
CCDC7-216ENST00000640058 RCOR3Q9P2K3 495 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-216ENST00000640058 A0A1W2PRQ8 180 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 ILVBLA1L0T0 632 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
CCDC7-216ENST00000640058 CTDSPLO15194 276 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 TSC22D2O75157 780 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 CSO75390 466 aaKnown RBP3.36□□□□□ -1.87
CCDC7-216ENST00000640058 CLN5O75503 358 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 GLULP15104 373 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 EZRP15311 586 aaKnown RBP3.36□□□□□ -1.87
CCDC7-216ENST00000640058 GSTO1P78417 241 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 ROR1Q01973 937 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF491Q8N8L2 437 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 CDHR1Q96JP9 859 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 ZCCHC17Q9NP64 241 aaKnown RBP3.36□□□□□ -1.87
CCDC7-216ENST00000640058 FAM212BQ9NTI7 297 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-216ENST00000640058 EXOC6BQ9Y2D4 811 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 PFASO15067 1338 aa3.36□□□□□ -1.87
CCDC7-216ENST00000640058 HDAC3O15379 428 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 HSPA4LO95757 839 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 RLN1P04808 185 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 MGMTP16455 207 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 TFCP2Q12800 502 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 SLC17A1Q14916 467 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 GSG1Q2KHT4 349 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 ALKBH5Q6P6C2 394 aaKnown RBP3.35□□□□□ -1.87
CCDC7-216ENST00000640058 TRAT1Q6PIZ9 186 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF525Q8N782 197 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 BEST4Q8NFU0 473 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 RAB3IPQ96QF0 476 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-216ENST00000640058 LSG1Q9H089 658 aaKnown RBP3.35□□□□□ -1.87
CCDC7-216ENST00000640058 VIPAS39Q9H9C1 493 aa3.35□□□□□ -1.87
CCDC7-216ENST00000640058 KBTBD13C9JR72 458 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 TNFSF11O14788 317 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 ST8SIA3O43173 380 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 OR6A2O95222 327 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
CCDC7-216ENST00000640058 MDH2P40926 338 aaKnown RBP3.34□□□□□ -1.87
CCDC7-216ENST00000640058 RGRP47804 291 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 EIF4EBP2Q13542 120 aaPredicted RBP3.34□□□□□ -1.87
CCDC7-216ENST00000640058 CNPY1Q3B7I2 92 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 ARMC3Q5W041 872 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 CASC4Q6P4E1 433 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 SIGLEC15Q6ZMC9 328 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 RAPH1Q70E73 1250 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 VSIG1Q86XK7 387 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF671Q8TAW3 534 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 SETD6Q8TBK2 473 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 TBCKQ8TEA7 893 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 NTNG2Q96CW9 530 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms