RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 THSD1Q9NS62 852 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GKN1Q9NS71 199 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 STOML2Q9UJZ1 356 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SNX7Q9UNH6 387 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF451Q9Y4E5 1061 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PCDHGB6Q9Y5F9 930 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 H0YIV9 168 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MFN2O95140 757 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 LRG1P02750 347 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RPN2P04844 631 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TSPAN19P0C672 248 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TRAPPC2P0DI81 140 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TRAPPC2BP0DI82 140 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 UBL4AP11441 157 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 VIPR1P32241 457 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GZMMP51124 257 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMPRSS3P57727 454 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ST3GAL4Q11206 333 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TRIM71Q2Q1W2 868 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RTP2Q5QGT7 225 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TRIQKQ629K1 86 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MZT2AQ6P582 158 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 C22orf39Q6P5X5 142 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 VTCN1Q7Z7D3 282 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMEM179BQ7Z7N9 219 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 NLRP8Q86W28 1048 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RNF130Q86XS8 419 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 LYSMD2Q8IV50 215 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CPXM2Q8N436 756 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TBC1D19Q8N5T2 526 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 C19orf18Q8NEA5 215 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 OR6K2Q8NGY2 324 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF461Q8TAF7 563 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ENKURQ8TC29 256 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 LKAAEAR1Q8TD35 194 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 NR4A3Q92570 626 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FEVQ99581 238 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CTRCQ99895 268 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 UCK2Q9BZX2 261 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ATG10Q9H0Y0 220 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CERS4Q9HA82 394 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 INIPQ9NRY2 104 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SIRT5Q9NXA8 310 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FBXO10Q9UK96 956 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ACTL7AQ9Y615 435 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PRSS21Q9Y6M0 314 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TLR4O00206 839 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CACNB4O00305 520 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FAAHO00519 579 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DIRAS1O95057 198 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 NR2F6P10588 404 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PIPP12273 146 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ATF6P18850 670 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 AQP1P29972 269 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CSTF2P33240 577 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RGS6P49758 472 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MLLT10P55197 1068 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ARPC4P59998 168 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DAB2P98082 770 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 VLDLRP98155 873 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MRPL28Q13084 256 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 QPRTQ15274 297 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DCST1Q5T197 706 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 XKRXQ6PP77 449 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 AGTRAPQ6RW13 159 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMC5Q6UXY8 1006 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF517Q6ZMY9 492 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CAMKMTQ7Z624 323 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ENTHD1Q8IYW4 607 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GPR156Q8NFN8 814 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMEM80Q96HE8 168 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 B3GALT6Q96L58 329 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FCRL1Q96LA6 429 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MYADMQ96S97 322 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CPEB1Q9BZB8 566 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLIRPQ9GZT3 109 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SMURF1Q9HCE7 757 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 KRCC1Q9NPI7 259 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 STUB1Q9UNE7 303 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SATB2Q9UPW6 733 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC9A8Q9Y2E8 581 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ENPP4Q9Y6X5 453 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MICAL3Q7RTP6 2002 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 H3BN98 237 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 B4GALT3O60512 393 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 VNN2O95498 520 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 GSTT2P0CG29 244 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 GSTT2BP0CG30 244 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 PTPN2P17706 415 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 SDC2P34741 201 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 RPS5P46782 204 aaKnown RBP3.8□□□□□ -1.8
SCN1A-214ENST00000637038 MASP1P48740 699 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 PXNP49023 591 aaPredicted RBP3.8□□□□□ -1.8
SCN1A-214ENST00000637038 SPINT3P49223 89 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 CRISP1P54107 249 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 DSTNP60981 165 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 ST8SIA6P61647 398 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 RHAGQ02094 409 aa3.8□□□□□ -1.8
SCN1A-214ENST00000637038 C2orf80Q0P641 193 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms