RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 KIAA1524Q8TCG1 905 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 GGHQ92820 318 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 DDX50Q9BQ39 737 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 ALKBH7Q9BT30 221 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 TRMT61BQ9BVS5 477 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 KRT23Q9C075 422 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 OR2B2Q9GZK3 357 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 TMEM245Q9H330 911 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 MRPL17Q9NRX2 175 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZCCHC3Q9NUD5 404 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 RNF7Q9UBF6 113 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 UBQLN2Q9UHD9 624 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 PIN4Q9Y237 131 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 TEX264Q9Y6I9 313 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 R4GN57 208 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNFX1Q9P2E3 1918 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 DOCK7Q96N67 2140 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZFHX4Q86UP3 3567 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 IGLV9-49A0A0B4J1Y8 123 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 TMEM129A0AVI4 362 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ARHGAP42A6NI28 874 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PRAC2D3DTV9 90 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 SSX5O60225 188 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 GLRA3O75311 464 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 CLN5O75503 358 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 REC8O95072 547 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ATP1A1P05023 1023 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ALPLP05186 524 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 F3P13726 295 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 AHCYP23526 432 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ASMTP46597 345 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 SMSP52788 366 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 IRX4P78413 519 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZXDBP98169 803 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PPP1R8Q12972 351 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 HERC3Q15034 1050 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 CCDC6Q16204 474 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 IZUMO4Q1ZYL8 232 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 RABL6Q3YEC7 729 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 CCDC40Q4G0X9 1142 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 C9orf57Q5W0N0 161 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 SPSB3Q6PJ21 355 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 MACC1Q6ZN28 852 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 FOXL2NBQ6ZUU3 175 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 BTN2A1Q7KYR7 527 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ASPGQ86U10 573 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 ISCA2Q86U28 154 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 KLHDC9Q8NEP7 349 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 OR4C15Q8NGM1 316 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PHOSPHO2Q8TCD6 241 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 NUDCD2Q8WVJ2 157 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PRCCQ92733 491 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 CD101Q93033 1021 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 TMEM143Q96AN5 459 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PRMT1Q99873 361 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 UPF3BQ9BZI7 483 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 XPO4Q9C0E2 1151 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 DDX47Q9H0S4 455 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 SYTL2Q9HCH5 934 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PHPT1Q9NRX4 125 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 KCNN3Q9UGI6 736 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 TNNQ9UQP3 1299 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 TECTAO75443 2155 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 PLXNA3P51805 1871 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 DMXL1Q9Y485 3027 aa4.54□□□□□ -1.68
TRAPPC9-216ENST00000634178 DMDP11532 3685 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 SIPA1L1O43166 1804 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 COL11A1P12107 1806 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 RIF1Q5UIP0 2472 aaKnown RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 CFAP47Q6ZTR5 3102 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 ANKDD1BA6NHY2 528 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 RASGRF2O14827 1237 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 CDK2AP2O75956 126 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 EDN1P05305 212 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 GSTA2P09210 222 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 AREGP15514 252 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 NR0B1P51843 470 aaKnown RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 ACLYP53396 1101 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 LINC00205P59089 165 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 GALK2Q01415 458 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 GPR17Q13304 367 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 SGCGQ13326 291 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 KEAP1Q14145 624 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 PTPN14Q15678 1187 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 HERC4Q5GLZ8 1057 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 BEND3Q5T5X7 828 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 MFSD7Q6UXD7 560 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 MARK2Q7KZI7 788 aaKnown RBP4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF575Q86XF7 245 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 LAX1Q8IWV1 398 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 KDM8Q8N371 416 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 MARVELD2Q8N4S9 558 aa4.53□□□□□ -1.68
TRAPPC9-216ENST00000634178 GBP7Q8N8V2 638 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms