RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LCN9Q8WX39 176 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 NXNL1Q96CM4 212 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SPDL1Q96EA4 605 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 MOCOSQ96EN8 888 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 MRPL57Q9BQC6 102 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SHCBP1LQ9BZQ2 653 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 XKR8Q9H6D3 395 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 WDR55Q9H6Y2 383 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 WASH6PQ9NQA3 447 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 GPRC5BQ9NZH0 403 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ADAMTS6Q9UKP5 1117 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 FBXO5Q9UKT4 447 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 RUVBL2Q9Y230 463 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC88CQ9P219 2028 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 NIPBLQ6KC79 2804 aaeCLIP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CSMD2Q7Z408 3487 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 HEATR9A2RTY3 570 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CLEC18AA5D8T8 446 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 RGSL1A5PLK6 1076 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TLCD2A6NGC4 264 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MROH6A6NGR9 719 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 C9J4A7 227 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SDHDO14521 159 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ZBTB11O95625 1053 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MSH3P20585 1137 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ATP5F1P24539 256 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ITGA3P26006 1051 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 DCTP40126 519 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CD97P48960 835 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ASPHQ12797 758 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ABRQ12979 859 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 UGT8Q16880 541 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PLEKHN1Q494U1 663 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PIGGQ5H8A4 983 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GPRC6AQ5T6X5 926 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF470Q6ECI4 717 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM154Q6P9G4 183 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ABRAXAS1Q6UWZ7 409 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CLEC18BQ6UXF7 455 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PIWIL4Q7Z3Z4 852 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GLT6D1Q7Z4J2 308 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PRSS42Q7Z5A4 293 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TRIM73Q86UV7 250 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SNX32Q86XE0 403 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CFAP206Q8IYR0 622 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GPR135Q8IZ08 494 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CLEC1AQ8NC01 280 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CLEC18CQ8NCF0 446 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 HEXDCQ8WVB3 486 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PYDC1Q8WXC3 89 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TSNARE1Q96NA8 513 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 OLFM1Q99784 485 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TIMM29Q9BSF4 260 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 HGH1Q9BTY7 390 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 FSD1LQ9BXM9 530 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ZBTB26Q9HCK0 441 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 IL26Q9NPH9 171 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SH3BGRL2Q9UJC5 107 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CDYLQ9Y232 598 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PTRH2Q9Y3E5 179 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PKP3Q9Y446 797 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 INTS1Q8N201 2190 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 FBN2P35556 2912 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 DCHS2Q6V1P9 2916 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MED13LQ71F56 2210 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 OTOGQ6ZRI0 2925 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GOLGA8QA0A0J9YX86 632 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GLYATL1P3A0A0U1RQE8 302 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 LOC100653049A0A140TA62 436 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GOLGA8OA6NCC3 632 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MAGEA13PA6NCF6 341 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GOLGA8NF8WBI6 632 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CCL22O00626 93 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 STX7O15400 261 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TOX3O15405 576 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 VEGFDO43915 354 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PEX1O43933 1283 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SKAP2O75563 359 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 KRT34O76011 436 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 NDST3O95803 873 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CLDN1O95832 211 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 FUT4P22083 530 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PEX2P28328 305 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 EPHA3P29320 983 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 KPNA2P52292 529 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ITGA1P56199 1179 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ACVR1Q04771 509 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF789Q5FWF6 425 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 RBM20Q5T481 1227 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MBNL2Q5VZF2 373 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 NEPROQ6NW34 567 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CNSTQ6PJW8 725 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SHISA6Q6ZSJ9 500 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 THAP5Q7Z6K1 395 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ZZZ3Q8IYH5 903 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PRSS58Q8IYP2 241 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 DSELQ8IZU8 1212 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PGAM4Q8N0Y7 254 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MIER2Q8N344 545 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms