RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SLC1A6P48664 564 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 MAPK12P53778 367 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 SOX8P57073 446 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 ACSM2AQ08AH3 577 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 STX3Q13277 289 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 ACSM2BQ68CK6 577 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 GALNT18Q6P9A2 607 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 CLNKQ7Z7G1 428 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 GALNT16Q8N428 558 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 EXD3Q8N9H8 876 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 RAB3IL1Q8TBN0 382 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 IMMP1LQ96LU5 166 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 LPAR4Q99677 370 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 C20orf27Q9GZN8 174 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 RPF2Q9H7B2 306 aaKnown RBP19.04■□□□□ 0.64
PTCD3-220ENST00000627371 ZNF395Q9H8N7 513 aaPredicted RBP19.04■□□□□ 0.64
PTCD3-220ENST00000627371 TEX10Q9NXF1 929 aaPredicted RBP19.04■□□□□ 0.64
PTCD3-220ENST00000627371 PTGDR2Q9Y5Y4 395 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 BOD1L1Q8NFC6 3051 aa19.04■□□□□ 0.64
PTCD3-220ENST00000627371 RGS14O43566 566 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 PCDH7O60245 1069 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 PRKRAO75569 313 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 SEC24DO94855 1032 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 AIFM1O95831 613 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 PPP2R1BP30154 601 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 TIA1P31483 386 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 TRA2BP62995 288 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 RAE1P78406 368 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 BTKQ06187 659 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 Q0VFX4 171 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 BST1Q10588 318 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 SPDYAQ5MJ70 313 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 PAPD4Q6PIY7 484 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 FDCSPQ8NFU4 85 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 TANKQ92844 425 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 METTL2AQ96IZ6 378 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 SORT1Q99523 831 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 WDR41Q9HAD4 459 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 HAO1Q9UJM8 370 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 RAP2CQ9Y3L5 183 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 PCDHGA9Q9Y5G4 932 aaKnown RBP19.03■□□□□ 0.64
PTCD3-220ENST00000627371 CPAMD8Q8IZJ3 1885 aa19.03■□□□□ 0.64
PTCD3-220ENST00000627371 LDB3O75112 727 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 GUCY1B2O75343 617 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 SFTPCP11686 197 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ITGA3P26006 1051 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ACTN3Q08043 901 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-220ENST00000627371 STX4Q12846 297 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 LY6DQ14210 128 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 NDUFAF5Q5TEU4 345 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 PLAG1Q6DJT9 500 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 Q6ZSR9 355 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 TRIM42Q8IWZ5 723 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 PARP9Q8IXQ6 854 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 DDIASQ8IXT1 998 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 KBTBD2Q8IY47 623 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 KIRREL3Q8IZU9 778 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ZNF781Q8N8C0 355 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 C7orf57Q8NEG2 295 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 OR2T11Q8NH01 316 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ANKRD9Q96BM1 317 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ABHD17AQ96GS6 310 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 SLC25A23Q9BV35 468 aa19.02■□□□□ 0.64
PTCD3-220ENST00000627371 ILKAPQ9H0C8 392 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-220ENST00000627371 G3BP2Q9UN86 482 aaKnown RBP19.02■□□□□ 0.64
PTCD3-220ENST00000627371 SAGE2PA6NJ88 616 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 A6NL46 340 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 PIP5K1BO14986 540 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 FGF17O60258 216 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 SERPINA7P05543 415 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 LINC00032P0C843 101 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 ICAM2P13598 275 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 AP2B1P63010 937 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 IGLV3-21P80748 117 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-220ENST00000627371 SERTAD2Q14140 314 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 MYBPC3Q14896 1274 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 TERF2Q15554 542 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 EXT1Q16394 746 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 ATG16L1Q676U5 607 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 OR52E8Q6IFG1 317 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 RIPOR1Q6ZS17 1223 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 C9orf43Q8TAL5 461 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-220ENST00000627371 FAM76AQ8TAV0 307 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 TM4SF18Q96CE8 201 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 BBC3Q96PG8 261 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-220ENST00000627371 NUDT9Q9BW91 350 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 EBPLQ9BY08 206 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 ALOXE3Q9BYJ1 711 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 LHPPQ9H008 270 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 LRTM1Q9HBL6 345 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 ADAP2Q9NPF8 381 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 C1orf109Q9NX04 203 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 GPR83Q9NYM4 423 aa19.01■□□□□ 0.63
PTCD3-220ENST00000627371 SMG1Q96Q15 3661 aaKnown RBP19.01■□□□□ 0.63
PTCD3-220ENST00000627371 TLN1Q9Y490 2541 aaKnown RBP19.01■□□□□ 0.63
PTCD3-220ENST00000627371 GNG14A0A1W2PPG7 69 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 GLOD5A6NK44 160 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 KLHL41O60662 606 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 SNNO75324 88 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms