RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CALCRP30988 508 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 POU3F4P49335 361 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 GPR143P51810 404 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 UFM1P61960 85 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 TRAM2Q15035 370 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 SV2CQ496J9 727 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CARD16Q5EG05 197 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 VASNQ6EMK4 673 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ELP2Q6IA86 826 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 C3P1Q6ZMU1 363 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 USP53Q70EK8 1073 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CEP68Q76N32 757 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 NLRC3Q7RTR2 1065 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 GPR149Q86SP6 731 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ZFAND4Q86XD8 727 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 Q8N402 240 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 C12orf45Q8N5I9 185 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 TRPV1Q8NER1 839 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 FAM162AQ96A26 154 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ULK4Q96C45 1275 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 LRRC46Q96FV0 321 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 SLC38A3Q99624 504 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 FBXL2Q9UKC9 423 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ZNF490Q9ULM2 529 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 TRBV23-1A0A0A0MS06 115 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 TCRBV16S1A1N1A0A5B0 115 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CXCR6O00574 342 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 ADAM12O43184 909 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 GLUD1P00367 558 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 DHFRP00374 187 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CYP17A1P05093 508 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CNPP09543 421 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 RNF224P0DH78 156 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PNPLA4P41247 253 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CXCR3P49682 368 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 WNT3AP56704 352 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 LILRA4P59901 499 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 NFKB2Q00653 900 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 ZNF33AQ06730 810 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 LRRC74AQ0VAA2 488 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 STX4Q12846 297 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 DUSP4Q13115 394 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PRKG2Q13237 762 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 ZNF628Q5EBL2 1059 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 WSCD1Q658N2 575 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 FAM109BQ6ICB4 259 aaPredicted RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 CXCL17Q6UXB2 119 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SLC16A13Q7RTY0 426 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 MIB1Q86YT6 1006 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CILP2Q8IUL8 1156 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 C1orf52Q8N6N3 182 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 GPR156Q8NFN8 814 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 ADAMTS19Q8TE59 1207 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PABPC5Q96DU9 382 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 MRPS24Q96EL2 167 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 PPM1MQ96MI6 270 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 CPEB1Q9BZB8 566 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 SEMA4CQ9C0C4 833 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 UFSP2Q9NUQ7 469 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SH3BP4Q9P0V3 963 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 MYEF2Q9P2K5 600 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 SEC14L4Q9UDX3 406 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SCP2D1Q9UJQ7 156 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 POMT2Q9UKY4 750 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 NEUROG3Q9Y4Z2 214 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SULT1C2O00338 296 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 IL1AP01583 271 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SPI1P17947 270 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 RAB3BP20337 219 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 FPR1P21462 350 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 WARSP23381 471 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 SSTR4P31391 388 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PXNP49023 591 aaPredicted RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 FNTBP49356 437 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 VEGFCP49767 419 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 AGFG1P52594 562 aaKnown RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 ST3GAL4Q11206 333 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PWP1Q13610 501 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 OPCMLQ14982 345 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 FBXO48Q5FWF7 155 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 FRMPD2BQ6IN97 320 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 DENND1CQ8IV53 801 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 ARHGAP12Q8IWW6 846 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 GABARAPL3Q9BY60 117 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SLC39A8Q9C0K1 460 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 BTBD1Q9H0C5 482 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 EVA1AQ9H8M9 152 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 SEMA4BQ9NPR2 832 aaPredicted RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 GPR83Q9NYM4 423 aa9.92□□□□□ -0.82
VPS11-207ENST00000620429 PLEKHB1Q9UF11 243 aaPredicted RBP9.92□□□□□ -0.82
VPS11-207ENST00000620429 MEIKINA0A087WXM9 373 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 A0A1B0GTL3 188 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 LOC390937A0A1W2PQ73 354 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ELOVL7A1L3X0 281 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 OR51F1A6NGY5 319 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 H3BM21 787 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 KPNA3O00505 521 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 SCAMP1O15126 338 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 MATN3O15232 486 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms