RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MAGEA2P43356 314 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 LHX1P48742 406 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 PSEN2P49810 448 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 BRCA2P51587 3418 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ATP12AP54707 1039 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 INSL4Q14641 139 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 KIAA0040Q15053 153 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 TIGD3Q6B0B8 471 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 FAM124AQ86V42 546 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ARRDC4Q8NCT1 418 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 CD99L2Q8TCZ2 262 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 TM9SF4Q92544 642 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 HIST1H2AHQ96KK5 128 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 FOPNLQ96NB1 174 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 HIST1H2AJQ99878 128 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 POLR2J3Q9H1A7 115 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ABCC13Q9NSE7 274 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 PLCXD1Q9NUJ7 323 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR6C2Q9NZP2 312 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 CRLS1Q9UJA2 301 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 EXO1Q9UQ84 846 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 NEUROG3Q9Y4Z2 214 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 A0A0D9SEW6 157 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 TCRBV16S1A1N1A0A5B0 115 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 C5orf58C9J3I9 102 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 RFXAPO00287 272 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 SGTAO43765 313 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 GASTP01350 101 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 HBQ1P09105 142 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 MAPK1P28482 360 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF33AQ06730 810 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 DOC2BQ14184 412 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 MICAQ29983 383 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 CDKL4Q5MAI5 379 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 WASH2PQ6VEQ5 465 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 CCDC117Q8IWD4 279 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 TOP6BLQ8N6T0 577 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR4A15Q8NGL6 344 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ARRDC2Q8TBH0 407 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 AP2M1Q96CW1 435 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ERMAPQ96PL5 475 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 PAAF1Q9BRP4 392 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 CD244Q9BZW8 370 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 ASB8Q9H765 288 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 FOLH1BQ9HBA9 442 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 B3GAT2Q9NPZ5 323 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 COPZ2Q9P299 210 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 GPR52Q9Y2T5 361 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 PCDHGA2Q9Y5H1 932 aa9.35□□□□□ -0.91
TNFAIP3-210ENST00000620204 MID1O15344 667 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 PROM1O43490 865 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 KCNJ13O60928 360 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 MMP2P08253 660 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ALPIP09923 528 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ACSM4P0C7M7 580 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 FNTBP49356 437 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 HNMTP50135 292 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 CPTPQ5TA50 214 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 MZT2AQ6P582 158 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC30A8Q8IWU4 369 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 NEIL3Q8TAT5 605 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZSWIM3Q96MP5 696 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 C16orf70Q9BSU1 422 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 DUSP26Q9BV47 211 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 KATNB1Q9BVA0 655 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 BOCQ9BWV1 1114 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 LIN7BQ9HAP6 207 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 POPDC3Q9HBV1 291 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 RPL36Q9Y3U8 105 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 C17orf102A2RUQ5 167 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 B4GALT3O60512 393 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 HCN1O60741 890 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC43A1O75387 559 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 PPM1BO75688 479 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 CH25HO95992 272 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ALDOBP05062 364 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 GIFP27352 417 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 LCN1P31025 176 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 HTR7P34969 479 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 XKP51811 444 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF33BQ06732 778 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 RBBP4Q09028 425 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ADAM15Q13444 863 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 BOP1Q14137 746 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 GPR176Q14439 515 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 HEPACAMQ14CZ8 416 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZBTB6Q15916 424 aa9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 GLYR1Q49A26 553 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-210ENST00000620204 MS4A15Q8N5U1 240 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms