RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 OLIG3Q7RTU3 272 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 OTUB2Q96DC9 234 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 MTERF3Q96E29 417 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 PDXPQ96GD0 296 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 LINC00615Q96LM1 132 aaPredicted RBP18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 NLNQ9BYT8 704 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 ZCCHC2Q9C0B9 1178 aaKnown RBP18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 LHX9Q9NQ69 397 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 IFT52Q9Y366 437 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 PCDHGA4Q9Y5G9 962 aa18.33■□□□□ 0.52
PCDHGB3-202ENST00000618934 ZAR1LA6NP61 321 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 BSGP35613 385 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 RPL3P39023 403 aaKnown RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 HSPB3Q12988 150 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 FRMPD2BQ6IN97 320 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 LYSMD2Q8IV50 215 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 DEPDC4Q8N2C3 294 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 PAWRQ96IZ0 340 aaKnown RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 LGR4Q9BXB1 951 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 MMP27Q9H306 513 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 ICKQ9UPZ9 632 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 NUP210Q8TEM1 1887 aaPredicted RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 A0A0G2JN53 185 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 PPM1DO15297 605 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 TBX1O43435 398 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 SOX14O95416 240 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 FGF19O95750 216 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 IFNW1P05000 195 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 RPLP0P05388 317 aaKnown RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 MAGP20916 626 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 GTF2E2P29084 291 aaKnown RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 SEPHS1P49903 392 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 CRISP1P54107 249 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 TUBA1BP68363 451 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 CNTN1Q12860 1018 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 TUBA1AQ71U36 451 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 SETD7Q8WTS6 366 aaKnown RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 TMEM19Q96HH6 336 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 DPEP2Q9H4A9 486 aa18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 CAB39Q9Y376 341 aaPredicted RBP18.32■□□□□ 0.52
PCDHGB3-202ENST00000618934 C17orf113A0A1B0GUU1 675 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 AGAP5A6NIR3 686 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 ZW10O43264 779 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 DDCP20711 480 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 PTGER1P34995 402 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 CTNNB1P35222 781 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 GJA8P48165 433 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 MAPK12P53778 367 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 MANFP55145 182 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 CAMK1Q14012 370 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 GAB4Q2WGN9 574 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 HNRNPA1L2Q32P51 320 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 DEPDC1Q5TB30 811 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 SAXO2Q658L1 398 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 LCTLQ6UWM7 567 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 PTCHD4Q6ZW05 846 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 USP43Q70EL4 1123 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 COMTD1Q86VU5 262 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 LACC1Q8IV20 430 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 MMAAQ8IVH4 418 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 TFGQ92734 400 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 PSD2Q9BQI7 771 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 SIRT3Q9NTG7 399 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 REV1Q9UBZ9 1251 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 MYO10Q9HD67 2058 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 A8MVJ9 347 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 H7BY64 318 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 AQP9O43315 295 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 UPK1BO75841 260 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 IFNA14P01570 189 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 VASPP50552 380 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 MED22Q15528 200 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 AGAP7PQ5VUJ5 663 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 KHDRBS2Q5VWX1 349 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 UNC5DQ6UXZ4 953 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 BCDIN3DQ7Z5W3 292 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 HMGN2P46Q86SG4 172 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 CACUL1Q86Y37 369 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 ETFBKMTQ8IXQ9 262 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 VANGL1Q8TAA9 524 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 NEURL3Q96EH8 262 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 PRAP1Q96NZ9 151 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 SERHL2Q9H4I8 314 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 KCND3Q9UK17 655 aa18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 RANBP2P49792 3224 aaKnown RBP18.31■□□□□ 0.52
PCDHGB3-202ENST00000618934 TRPM6Q9BX84 2022 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 PRAMEF27A3QJZ7 478 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 TMPRSS11DO60235 418 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 EFCAB14O75071 495 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 MFN2O95140 757 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 STATHP02808 62 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 EIF2B2P49770 351 aaKnown RBP18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 DPTQ07507 201 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 STEAP3Q658P3 488 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 TCTN3Q6NUS6 607 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 PDZD3Q86UT5 571 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 TAGAPQ8N103 731 aa18.3■□□□□ 0.52
PCDHGB3-202ENST00000618934 CYP4Z2PQ8N1L4 340 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms