RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	TMEM207	Q6UWW9	146 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	KRT74	Q7RTS7	529 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	DNAJC5G	Q8N7S2	189 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	IPMK	Q8NFU5	416 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	OR1M1	Q8NGA1	313 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	OR52K2	Q8NGK3	314 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	CHTF18	Q8WVB6	975 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	FCRL2	Q96LA5	508 aa	Predicted RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	H2AFJ	Q9BTM1	129 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	ZNF768	Q9H5H4	540 aa	Known RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	RGS18	Q9NS28	235 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	THUMPD1	Q9NXG2	353 aa	Known RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	CNOT2	Q9NZN8	540 aa	Known RBP	11.07	□□□□□ -0.64
TP53-222	ENST00000617185	PADI2	Q9Y2J8	665 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	PTCH2	Q9Y6C5	1203 aa		11.07	□□□□□ -0.64
TP53-222	ENST00000617185	TSC2	P49815	1807 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185		A0A0G2JPF8	293 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	HNRNPCL3	B7ZW38	293 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	ARVCF	O00192	962 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	DIRAS1	O95057	198 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	NMB	P08949	121 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SMIM6	P0DI80	62 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	HNRNPCL4	P0DMR1	293 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SLC6A1	P30531	599 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	AGFG1	P52594	562 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	MANEAL	Q5VSG8	457 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SCD5	Q86SK9	330 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	STX12	Q86Y82	276 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	MCAT	Q8IVS2	390 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	UXS1	Q8NBZ7	420 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	TET1	Q8NFU7	2136 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	GANC	Q8TET4	914 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	PABPC5	Q96DU9	382 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	FAM120B	Q96EK7	910 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	MNT	Q99583	582 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SOST	Q9BQB4	213 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	CSNK1G1	Q9HCP0	422 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	B3GAT2	Q9NPZ5	323 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SCP2D1	Q9UJQ7	156 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	FBXL2	Q9UKC9	423 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	ERVK-19	Q9WJR5	959 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	TP53BP1	Q12888	1972 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	PMS2P1	A4D2B8	440 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	GTPBP1	O00178	669 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	GJB3	O75712	270 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	HTR3B	O95264	441 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	WISP3	O95389	354 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	LPL	P06858	475 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	NNMT	P40261	264 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SOX3	P41225	446 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	CHRNA4	P43681	627 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	CXCR3	P49682	368 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SMS	P52788	366 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	IL18	Q14116	193 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	OPCML	Q14982	345 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	PTPRR	Q15256	657 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SGCA	Q16586	387 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	MAPKAPK3	Q16644	382 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	AP5B1	Q2VPB7	878 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	GLB1L	Q6UWU2	654 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	ASPG	Q86U10	573 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	PAQR7	Q86WK9	346 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	THEM5	Q8N1Q8	247 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	RYBP	Q8N488	228 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	EIF4E3	Q8N5X7	224 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	C1orf52	Q8N6N3	182 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	OR9Q1	Q8NGQ5	310 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	POF1B	Q8WVV4	589 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SCRN2	Q96FV2	425 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	CCM2	Q9BSQ5	444 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	SLC39A8	Q9C0K1	460 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	DNTTIP1	Q9H147	329 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	ACTL8	Q9H568	366 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	PRDM9	Q9NQV7	894 aa		11.06	□□□□□ -0.64
TP53-222	ENST00000617185	CFAP20	Q9Y6A4	193 aa	Known RBP	11.06	□□□□□ -0.64
TP53-222	ENST00000617185	TCRBV16S1A1N1	A0A5B0	115 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	PER2	O15055	1255 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CCNDBP1	O95273	360 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	S100A9	P06702	114 aa	Known RBP	11.05	□□□□□ -0.64
TP53-222	ENST00000617185	G6PD	P11413	515 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	MTHFD2	P13995	350 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CD1D	P15813	335 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	GABRB1	P18505	474 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CXCL3	P19876	107 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	EFEMP1	Q12805	493 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CCDC85B	Q15834	202 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-222	ENST00000617185	ANKS6	Q68DC2	871 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CNIH2	Q6PI25	160 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	NLRC3	Q7RTR2	1065 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	TMEM173	Q86WV6	379 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-222	ENST00000617185	ZNF565	Q8N9K5	539 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	MRPL48	Q96GC5	212 aa	Known RBP	11.05	□□□□□ -0.64
TP53-222	ENST00000617185	KLHL5	Q96PQ7	755 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	OR2M2	Q96R28	347 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	ZBTB18	Q99592	522 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	PKMYT1	Q99640	499 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	OR51J1	Q9H342	316 aa		11.05	□□□□□ -0.64
TP53-222	ENST00000617185	CDCP1	Q9H5V8	836 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms