RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MAPKAPK2P49137 400 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 ARF5P84085 180 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 RPL6Q02878 288 aaKnown RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 PCBP1Q15365 356 aaKnown RBP eCLIP12.58□□□□□ -0.4
MSH6-214ENST00000616033 CLEC12AQ5QGZ9 265 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 BCL2L15Q5TBC7 163 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 NKIRAS2Q9NYR9 191 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 IL20RAQ9UHF4 553 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 A3GALT2U3KPV4 340 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 LINC01387J3KSC0 135 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 SEPT4O43236 478 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
MSH6-214ENST00000616033 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 GZMKP49863 264 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 DSTNP60981 165 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 SRSF11Q05519 484 aaKnown RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 GRB14Q14449 540 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 ALG1LQ6GMV1 187 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 TRIM69Q86WT6 500 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 NPAS3Q8IXF0 933 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 OR52E4Q8NGH9 312 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 SLC29A3Q9BZD2 475 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 ASAH2Q9NR71 780 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 C5AR2Q9P296 337 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 ZNF624Q9P2J8 865 aaPredicted RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 MN1Q10571 1320 aaPredicted RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 ANKDD1BA6NHY2 528 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 DRGXA6NNA5 263 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 TBL1XO60907 577 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 KLKB1P03952 638 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ATP5C1P36542 298 aaKnown RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 CRYBB2P43320 205 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 DOC2AQ14183 400 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ZSWIM7Q19AV6 140 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.57□□□□□ -0.41e-10■■■□□ 17.6
MSH6-214ENST00000616033 ANKRD54Q6NXT1 300 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ZFAND1Q8TCF1 268 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ZBED6CLQ96FA7 236 aaPredicted RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 METTL2AQ96IZ6 378 aaKnown RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 MAGEB10Q96LZ2 347 aaPredicted RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 QRFPRQ96P65 431 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 WASH6PQ9NQA3 447 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 STUB1Q9UNE7 303 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ANKRD36A6QL64 1941 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 LOC105369274A0A096LPK9 316 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 INMT-MINDY4F8WBC2 141 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 HNF1BP35680 557 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 CDK6Q00534 326 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 MLLT1Q03111 559 aaPredicted RBP12.57□□□□□ -0.4
MSH6-214ENST00000616033 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 CCSMST1Q4G0I0 132 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 USP45Q70EL2 814 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 OR4N4Q8N0Y3 316 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 UPRTQ96BW1 309 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 RADILQ96JH8 1075 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 UQCC2Q9BRT2 126 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 OR51B5Q9H339 312 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 ANKRA2Q9H9E1 313 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 DNAJC11Q9NVH1 559 aa12.57□□□□□ -0.4
MSH6-214ENST00000616033 CD8B2A6NJW9 211 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SYN3O14994 580 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 KDELR3O43731 214 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 PLATP00750 562 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 PDGFAP04085 211 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 PRKAR1AP10644 381 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CD8BP10966 210 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CTRB1P17538 263 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 HMGCLP35914 325 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CPT1AP50416 773 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ZNF91Q05481 1191 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 RPA4Q13156 261 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ZNF385BQ569K4 471 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 CTRB2Q6GPI1 263 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 TPGS1Q6ZTW0 290 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 KCTD20Q7Z5Y7 419 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 LAPTM4BQ86VI4 370 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SETD6Q8TBK2 473 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MARC2Q969Z3 335 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 POLR2J3Q9H1A7 115 aaKnown RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 PLCXD1Q9NUJ7 323 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ACER3Q9NUN7 267 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 MGAT4AQ9UM21 535 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SCML1Q9UN30 329 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GTPBP1O00178 669 aaKnown RBP12.56□□□□□ -0.4
MSH6-214ENST00000616033 PRRG1O14668 218 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SCG5P05408 212 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 ALAS2P22557 587 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 SOX18P35713 384 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 XKP51811 444 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 NCF4Q15080 339 aa12.56□□□□□ -0.4
MSH6-214ENST00000616033 GCNT6Q5T4J0 391 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms