RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 APODP05090 189 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 TAF1AQ15573 450 aaPredicted RBP20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 TOR2AQ5JU69 321 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 RETSATQ6NUM9 610 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 ZNF551Q7Z340 670 aaPredicted RBP20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 VTCN1Q7Z7D3 282 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 ZNF366Q8N895 744 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 TP53I13Q8NBR0 393 aaPredicted RBP20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 FAM3CQ92520 227 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 NELL1Q92832 810 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 USP7Q93009 1102 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 HHIPQ96QV1 700 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 INPP5KQ9BT40 448 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 AMBNQ9NP70 447 aa20.95■□□□□ 0.94
POLR2J3-220ENST00000613744 RFXANKO14593 260 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 SMAD6O43541 496 aaKnown RBP20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 HCN1O60741 890 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 KCNK5O95279 499 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 EGFP01133 1207 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 CSF3P09919 207 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 PRSS56P0CW18 603 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 UQCRC1P31930 480 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 MED22Q15528 200 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 MLF2Q15773 248 aaPredicted RBP20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 TJAP1Q5JTD0 557 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 CTSL3PQ5NE16 218 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 PDZK1Q5T2W1 519 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 PLET1Q6UQ28 207 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 AMIGO1Q86WK6 493 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 LAX1Q8IWV1 398 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 LPCAT1Q8NF37 534 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 LRRC20Q8TCA0 184 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 NTMT1Q9BV86 223 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 TIGARQ9NQ88 270 aa20.94■□□□□ 0.94
POLR2J3-220ENST00000613744 PRR23AA6NEV1 266 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 NIPSNAP2O75323 286 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 EBLN1P0CF75 366 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 PSKH1P11801 424 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 PTGS2P35354 604 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 ETV3P41162 512 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 KIR2DL3P43628 341 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 RGRP47804 291 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 CRISP3P54108 245 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 TAB1Q15750 504 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 FAM205BPQ63HN1 556 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 ALG1LQ6GMV1 187 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 FAM131AQ6UXB0 335 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 FAM124AQ86V42 546 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 RGL4Q8IZJ4 473 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 B3GNT7Q8NFL0 401 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 HYLS1Q96M11 299 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 OR5M11Q96RB7 305 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 TRIB3Q96RU7 358 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 CNPPD1Q9BV87 410 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 TM6SF2Q9BZW4 377 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 IMPAD1Q9NX62 359 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 GLTPQ9NZD2 209 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 WASH3PC4AMC7 463 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 K7EQS6 105 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 MANBAO00462 879 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 FFAR2O15552 330 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 HLA-DQB1P01920 261 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 ACPPP15309 386 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 MAPK1P28482 360 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 NUDT6P53370 316 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 MAB21L1Q13394 359 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 HKDC1Q2TB90 917 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 LCN1P1Q5VSP4 162 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 SAXO2Q658L1 398 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 PLAG1Q6DJT9 500 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 HSDL2Q6YN16 418 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 CLDN22Q8N7P3 220 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 DUSP18Q8NEJ0 188 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 MTG2Q9H4K7 406 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 MS4A12Q9NXJ0 267 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 HCN2Q9UL51 889 aa20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 CFAP20Q9Y6A4 193 aaKnown RBP20.93■□□□□ 0.94
POLR2J3-220ENST00000613744 BNIP3LO60238 219 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 AZGP1P25311 298 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 RHOAP61586 193 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 HMGCS1Q01581 520 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 LARS2Q15031 903 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 SBSNQ6UWP8 590 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 GPR155Q7Z3F1 870 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 SLC44A2Q8IWA5 706 aaPredicted RBP20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 WFIKKN2Q8TEU8 576 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 UBTD2Q8WUN7 234 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 TMEM80Q96HE8 168 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 OPALINQ96PE5 141 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 PSKH2Q96QS6 385 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 BEX2Q9BXY8 128 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 SLC25A13Q9UJS0 675 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 E5RI56 91 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 IL1AP01583 271 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 PDGFAP04085 211 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 PSMA1P25786 263 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 CDKN2CP42773 168 aa20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 IDH2P48735 452 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-220ENST00000613744 MAPK12P53778 367 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms