RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 IQCKQ8N0W5 287 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 CNPY4Q8N129 248 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 PTPMT1Q8WUK0 201 aaPredicted RBP11.82□□□□□ -0.52
CSTF1-208ENST00000613138 SLC12A4Q9UP95 1085 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 NINQ8N4C6 2090 aa11.82□□□□□ -0.52
CSTF1-208ENST00000613138 POLEQ07864 2286 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GTF3C1Q12789 2109 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 MYO7BQ6PIF6 2116 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 DYTNA2CJ06 578 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 TMEM200CA6NKL6 621 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GABRR3A8MPY1 467 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 COPEO14579 308 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 PROM1O43490 865 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 CTNSO60931 367 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 CDH16O75309 829 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 DDAH2O95865 285 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 OTCP00480 354 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 FAM58BPP0C7Q3 252 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 RNF224P0DH78 156 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 MYL2P10916 166 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SERPINB3P29508 390 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SERPINB1P30740 379 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 CD96P40200 585 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 HMGCS1Q01581 520 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 TNFRSF17Q02223 184 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 FOLH1Q04609 750 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GALNT1Q10472 559 aaPredicted RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 IFT88Q13099 833 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GGTA1PQ4G0N0 100 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 FAM180BQ6P0A1 224 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GPRIN3Q6ZVF9 776 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 TRABD2AQ86V40 505 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 GPR180Q86V85 440 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ZNF227Q86WZ6 799 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 CCDC63Q8NA47 563 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SRFBP1Q8NEF9 429 aaKnown RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ARMC2Q8NEN0 867 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 B3GNT7Q8NFL0 401 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 SELENOMQ8WWX9 145 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 HAS2Q92819 552 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 REPS1Q96D71 796 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 L3HYPDHQ96EM0 354 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 MECRQ9BV79 373 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ELOVL6Q9H5J4 265 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 DDX31Q9H8H2 851 aaKnown RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 KLHL1Q9NR64 748 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 TRPS1Q9UHF7 1281 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 DCDC2Q9UHG0 476 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ADGRE2Q9UHX3 823 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
CSTF1-208ENST00000613138 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 HECTD1Q9ULT8 2610 aa11.81□□□□□ -0.52
CSTF1-208ENST00000613138 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 FLNBO75369 2602 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 FREM3P0C091 2139 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 OR5H15A6NDH6 313 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 C17orf105B2RV13 164 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 CLDN4O14493 209 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ZNHIT1O43257 154 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ZNF354AO60765 605 aaPredicted RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 CRHR1P34998 444 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 NAGLUP54802 743 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 MLF1P58340 268 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 PHEXP78562 749 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 TBL3Q12788 808 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 STX4Q12846 297 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 CUL3Q13618 768 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 PCLAFQ15004 111 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 TLR1Q15399 786 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 MEP1AQ16819 746 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 EMBQ6PCB8 327 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 COMMD6Q7Z4G1 85 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 C10orf107Q8IVU9 208 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ZCCHC7Q8N3Z6 543 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 C1orf52Q8N6N3 182 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 BANPQ8N9N5 519 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 AGAP11Q8TF27 550 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ZNF382Q96SR6 550 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 SERPINI1Q99574 410 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ACPTQ9BZG2 426 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 OR8D2Q9GZM6 311 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 ROGDIQ9GZN7 287 aa11.8□□□□□ -0.52
CSTF1-208ENST00000613138 RPF2Q9H7B2 306 aaKnown RBP11.8□□□□□ -0.52
CSTF1-208ENST00000613138 MID1IP1Q9NPA3 183 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms