RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 STHQ8IWL8 128 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PEX5LQ8IYB4 626 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PRSS33Q8NF86 280 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 UBTD2Q8WUN7 234 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 LIPHQ8WWY8 451 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6V0BQ99437 205 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 S1PR3Q99500 378 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 FAM213AQ9BRX8 229 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 LRRC61Q9BV99 259 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 NUSAP1Q9BXS6 441 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PARLQ9H300 379 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PLEKHA3Q9HB20 300 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 IL1RAPQ9NPH3 570 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 FAM212BQ9NTI7 297 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 UBQLN2Q9UHD9 624 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6V0A2Q9Y487 856 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PRSS21Q9Y6M0 314 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 NOTCH2Q04721 2471 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 IGHV4-30-2A0A087WSY4 118 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 OGTO15294 1046 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 VEGFDO43915 354 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 SNAP91O60641 907 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 SORBS2O94875 1100 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ADORA3P0DMS8 318 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 CD1DP15813 335 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 UGT1A6P19224 532 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 CYP3A5P20815 502 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 FHITP49789 147 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 CRYBA2P53672 197 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 GALK2Q01415 458 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 MFGE8Q08431 387 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ELAVL2Q12926 359 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 IFT88Q13099 833 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 LY6DQ14210 128 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 MEF2DQ14814 521 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 HEPACAMQ14CZ8 416 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 TTC31Q49AM3 519 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ETFRF1Q6IPR1 90 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 TATDN1Q6P1N9 297 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 METTL7BQ6UX53 244 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 UNC5DQ6UXZ4 953 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF730Q6ZMV8 503 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ERC1Q8IUD2 1116 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 OR4N5Q8IXE1 308 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 OR6F1Q8NGZ6 308 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 OR4A16Q8NH70 328 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 SPPL2AQ8TCT8 520 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 LRRC15Q8TF66 581 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF689Q96CS4 500 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 TBC1D31Q96DN5 1066 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 SLC45A3Q96JT2 553 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 AGPAT1Q99943 283 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 PKP2Q99959 881 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 DBNDD1Q9H9R9 158 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 CYP39A1Q9NYL5 469 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 AKAP7Q9P0M2 348 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 HMG20BQ9P0W2 317 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 THAP10Q9P2Z0 257 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 MUTYHQ9UIF7 546 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 TDRKHQ9Y2W6 561 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 KNSTRNQ9Y448 316 aa3.55□□□□□ -1.84
SMCHD1-213ENST00000609587 MYH15Q9Y2K3 1946 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 OR5H15A6NDH6 313 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TMCO5BA8MYB1 307 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 E9PQ18 207 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 SLC28A1O00337 649 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF749O43361 778 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6V1G1O75348 118 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TPM2P07951 284 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 MMP10P09238 476 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TPBGLP0DKB5 382 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CT45A8P0DMV1 189 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CT45A9P0DMV2 189 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 GPX3P22352 226 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 GLRA1P23415 457 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6V1E1P36543 226 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CAPGP40121 348 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 TAF6P49848 677 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 NT5C2P49902 561 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 PEX3P56589 373 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 FKBP3Q00688 224 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 SMC1AQ14683 1233 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 KRT31Q15323 416 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 KNOP1Q1ED39 458 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 WSCD2Q2TBF2 565 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 PARP10Q53GL7 1025 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CT45A2Q5DJT8 189 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 NEPROQ6NW34 567 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 ABRAXAS1Q6UWZ7 409 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 CCDC73Q6ZRK6 1079 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 STXBP4Q6ZWJ1 553 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 MCM10Q7L590 875 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
SMCHD1-213ENST00000609587 C17orf64Q86WR6 236 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms