RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 EEDO75530 441 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 UQCRHP07919 91 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 PLA2G2AP14555 144 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 GSTM5P46439 218 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 HNRNPFP52597 415 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 TRA2BP62995 288 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 TLR1Q15399 786 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 MEP1AQ16819 746 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 NADK2Q4G0N4 442 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 SPIN4Q56A73 249 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 TNFAIP8L3Q5GJ75 292 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 SLC6A19Q695T7 634 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 C10orf107Q8IVU9 208 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 ARMC10Q8N2F6 343 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 MORN4Q8NDC4 146 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 TMEM52Q8NDY8 209 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 NFAM1Q8NET5 270 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 DNAJB14Q8TBM8 379 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 METTL2AQ96IZ6 378 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 ZIM3Q96PE6 472 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 FARSBQ9NSD9 589 aaKnown RBP13.36□□□□□ -0.27
HDDC2-209ENST00000609477 SIRT5Q9NXA8 310 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 ATG4BQ9Y4P1 393 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 CLCA3PQ9Y6N3 262 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 CPAMD8Q8IZJ3 1885 aa13.36□□□□□ -0.27
HDDC2-209ENST00000609477 J3QKU1 62 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 UBFD1O14562 309 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 TM9SF1O15321 606 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 DYRK3O43781 588 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 NPHS1O60500 1241 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 UROSP10746 265 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 COX7A2P14406 83 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 TPP2P29144 1249 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 GALNSP34059 522 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 CLCN2P51788 898 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 SGO1Q5FBB7 561 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 ACER2Q5QJU3 275 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 CEP85LQ5SZL2 805 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 CCNYL2Q5T2Q4 361 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 RPUSD3Q6P087 351 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 LINC00696Q6ZRV3 163 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 RNF165Q6ZSG1 346 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 COMMD6Q7Z4G1 85 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 SIRT6Q8N6T7 355 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 CHTF18Q8WVB6 975 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 ANKRD9Q96BM1 317 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 VMP1Q96GC9 406 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 MRPL1Q9BYD6 325 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 ILKAPQ9H0C8 392 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 EPN3Q9H201 632 aa13.35□□□□□ -0.27
HDDC2-209ENST00000609477 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 ZBTB20Q9HC78 741 aaPredicted RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 PNO1Q9NRX1 252 aaKnown RBP13.35□□□□□ -0.27
HDDC2-209ENST00000609477 A0A1W2PR48 441 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 C1orf226A1L170 272 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 TMPRSS11DO60235 418 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 LDB3O75112 727 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 SPAG7O75391 227 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 CRCPO75575 148 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 MYO1DO94832 1006 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 SNUPNO95149 360 aaKnown RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 GPR75O95800 540 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 IFNA16P05015 189 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 KLK1P06870 262 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 CELA2AP08217 269 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 FGF4P08620 206 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 NR2F6P10588 404 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 ALDH3A1P30838 453 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 STT3AP46977 705 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 GPR143P51810 404 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 MAPK12P53778 367 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 ARG2P78540 354 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 TLE1Q04724 770 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 PLEKHN1Q494U1 663 aaPredicted RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 OR52E8Q6IFG1 317 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 GALNT18Q6P9A2 607 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 TRIM46Q7Z4K8 759 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 ST13P4Q8IZP2 240 aaPredicted RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 APCDD1LQ8NCL9 501 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 OR8K3Q8NH51 312 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 FAM76AQ8TAV0 307 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 ART5Q96L15 291 aa13.34□□□□□ -0.27
HDDC2-209ENST00000609477 GATA5Q9BWX5 397 aaPredicted RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
HDDC2-209ENST00000609477 RRAGDQ9NQL2 400 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms