RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RHOBTB1O94844 696 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PTTG1O95997 202 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 APOA1P02647 267 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FGGP02679 453 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LCKP06239 509 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CD63P08962 238 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRF1P14222 555 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PSMC3P17980 439 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 OPRL1P41146 370 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MAGEB1P43366 347 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC6A9P48067 706 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KLK7P49862 253 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TOB1P50616 345 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CDH4P55283 916 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TAS2R60P59551 318 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTBP60709 375 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTA2P62736 377 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTG1P63261 375 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTG2P63267 376 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTC1P68032 377 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTA1P68133 377 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACSM1Q08AH1 577 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KRR1Q13601 381 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GRM7Q14831 915 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF169Q14929 603 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PSMD5Q16401 504 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 HLFQ16534 295 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SPATA46Q5T0L3 261 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LIPNQ5VXI9 398 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 UQCC3Q6UW78 93 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TMIGD1Q6UXZ0 262 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CREB3L2Q70SY1 520 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CATSPER3Q86XQ3 398 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 WFDC8Q8IUA0 241 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CCDC185Q8N715 623 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CYB561A3Q8NBI2 242 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SH3RF2Q8TEC5 729 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CD101Q93033 1021 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MIB2Q96AX9 1013 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MBOAT7Q96N66 472 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZYG11BQ9C0D3 744 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC22A4Q9H015 551 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 OR51M1Q9H341 326 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PIGUQ9H490 435 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RGCCQ9H4X1 137 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TDRD3Q9H7E2 651 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MINDY3Q9H8M7 445 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CXorf21Q9HAI6 301 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KLHL1Q9NR64 748 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CHST7Q9NS84 486 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CNOT2Q9NZN8 540 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CD274Q9NZQ7 290 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CD8B2A6NJW9 211 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ANXA2P2A6NMY6 339 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF729A6NN14 1252 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 WASH4PA8MWX3 477 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 A8MZ25 164 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 HACD1B0YJ81 288 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF26H0Y7S4 382 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 I3L521 148 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 WNT10BO00744 389 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TM4SF5O14894 197 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CTDSPLO15194 276 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SEPT4O43236 478 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF4O60810 478 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RPS6KA4O75676 772 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 DEXIO95424 95 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 BMP15O95972 392 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 IFNA4P05014 189 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CCL2P13500 99 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACP5P13686 325 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MALP21145 153 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 NTSR1P30989 418 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ID1P41134 155 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MAP2K3P46734 347 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RGS4P49798 205 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 KHKP50053 298 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC18A1P54219 525 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CDH6P55285 790 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SNU13P55769 128 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ANTXR2P58335 489 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MLF1P58340 268 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 AP1S1P61966 158 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF200P98182 395 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 INCA1Q0VD86 236 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TRAF2Q12933 501 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 IL18Q14116 193 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF5Q5TYX0 476 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF9Q5VWM5 478 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF6Q5VXH4 476 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 BHLHB9Q6PI77 547 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TFAP2EQ6VUC0 442 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LHFPL3Q86UP9 236 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms