RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SLC45A3	Q96JT2	553 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	MARK4	Q96L34	752 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	SOX17	Q9H6I2	414 aa	Predicted RBP	20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	LYRM4	Q9HD34	91 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	PHF11	Q9UIL8	331 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	NXT1	Q9UKK6	140 aa	Known RBP	20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	FBXW2	Q9UKT8	454 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	CHST10	O43529	356 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	TMPRSS11D	O60235	418 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	G6PD	P11413	515 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	FOLR3	P41439	243 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	XCR1	P46094	333 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	ATP4B	P51164	291 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	RUNX2	Q13950	521 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	MRM1	Q6IN84	353 aa	Known RBP	20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	CCDC81	Q6ZN84	652 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	SHISA6	Q6ZSJ9	500 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	TMEM132C	Q8N3T6	1108 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	EFCAB3	Q8N7B9	438 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	OR2Y1	Q8NGV0	311 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	MIEF2	Q96C03	454 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	PEX11G	Q96HA9	241 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	TSSK3	Q96PN8	268 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	RBCK1	Q9BYM8	510 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	TGIF2	Q9GZN2	237 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	MYNN	Q9NPC7	610 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	C14orf105	Q9NVL8	296 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	MS4A12	Q9NXJ0	267 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	MAPRE3	Q9UPY8	281 aa		20.69	■□□□□ 0.9
LTBP4-227	ENST00000600026	CREG1	O75629	220 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	DCTN3	O75935	186 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	ZGLP1	P0C6A0	271 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	LIM2	P55344	173 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	TAS2R50	P59544	299 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	IL10RA	Q13651	578 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	SQLE	Q14534	574 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	PDCD4	Q53EL6	469 aa	Known RBP	20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	IKBIP	Q70UQ0	350 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	GPR180	Q86V85	440 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	PRSS58	Q8IYP2	241 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	MIER2	Q8N344	545 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	ADAMTS18	Q8TE60	1221 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	TM4SF18	Q96CE8	201 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	FAIM2	Q9BWQ8	316 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	DPY30	Q9C005	99 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	BRINP2	Q9C0B6	783 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	WDR41	Q9HAD4	459 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	BAIAP2L1	Q9UHR4	511 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	DAPP1	Q9UN19	280 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	GPR45	Q9Y5Y3	372 aa		20.68	■□□□□ 0.9
LTBP4-227	ENST00000600026	ZNF891	A8MT65	544 aa	Predicted RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	JRK	O75564	520 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	BMP10	O95393	424 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	UMOD	P07911	640 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	RNH1	P13489	461 aa	Known RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	CPN2	P22792	545 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	TACR1	P25103	407 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	TLX1	P31314	330 aa	Predicted RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	BUD31	P41223	144 aa	Predicted RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	UCN	P55089	124 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	HNRNPH2	P55795	449 aa	Known RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	TMPRSS3	P57727	454 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	RAB38	P57729	211 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	KLC1	Q07866	573 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	MAPKAP1	Q9BPZ7	522 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	CPNE5	Q9HCH3	593 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	ASB4	Q9Y574	426 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	COPG1	Q9Y678	874 aa	Known RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	CELSR3	Q9NYQ7	3312 aa		20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	FASN	P49327	2511 aa	Known RBP	20.67	■□□□□ 0.9
LTBP4-227	ENST00000600026	PSMD12	O00232	456 aa	Predicted RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	PRMT3	O60678	531 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	IL3	P08700	152 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	HPCAL1	P37235	193 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	RPL3	P39023	403 aa	Known RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	MRPL19	P49406	292 aa	Known RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	CLDN8	P56748	225 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	C2orf80	Q0P641	193 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	ERV3-1	Q14264	604 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	PTGR1	Q14914	329 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	HEPACAM	Q14CZ8	416 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	MTDH	Q86UE4	582 aa	Known RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	CPSF7	Q8N684	471 aa	Known RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	CLHC1	Q8NHS4	586 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	TBC1D20	Q96BZ9	403 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	OR1F2P	Q96R84	312 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	ZBTB18	Q99592	522 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	CRB3	Q9BUF7	120 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	SDR39U1	Q9NRG7	319 aa	Predicted RBP	20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	ZIM2	Q9NZV7	527 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	CROCC	Q5TZA2	2017 aa		20.66	■□□□□ 0.9
LTBP4-227	ENST00000600026	FCHO1	O14526	889 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	NKX2-8	O15522	239 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	PROM1	O43490	865 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	FH	P07954	510 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	DRD2	P14416	443 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	DDX5	P17844	614 aa	Known RBP	20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	PRPS1L1	P21108	318 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	IL10	P22301	178 aa		20.65	■□□□□ 0.9
LTBP4-227	ENST00000600026	EFNA3	P52797	238 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms