RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 RPS26P62854 115 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 NKX3-2P78367 333 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 CYP4F8P98187 520 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 PUM1Q14671 1186 aaKnown RBP eCLIP16.58■□□□□ 0.242e-7■■■■□ 22.1
ARHGEF1-213ENST00000595897 CCDC58Q4VC31 144 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 ZNF770Q6IQ21 691 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 XKRXQ6PP77 449 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 DEF8Q6ZN54 512 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 RNF180Q86T96 592 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 GALNT6Q8NCL4 622 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 ECHDC3Q96DC8 303 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 MIEF1Q9NQG6 463 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 TVP23BQ9NYZ1 205 aa16.58■□□□□ 0.24
ARHGEF1-213ENST00000595897 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLC35F4A4IF30 521 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 ARRDC5A6NEK1 342 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 OR6C70A6NIJ9 312 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 GREM1O60565 184 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 TPST2O60704 377 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CKMP06732 381 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CSF3P09919 207 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CLEC2LP0C7M8 214 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CHRNB1P11230 501 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 PCBP3P57721 371 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 HEPACAMQ14CZ8 416 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 QPRTQ15274 297 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 MPEG1Q2M385 716 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 DDI2Q5TDH0 399 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 REEP3Q6NUK4 255 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CEACAM20Q6UY09 585 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 Q6ZVL8 140 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 NANOGP1Q8N7R0 232 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 PROKR2Q8NFJ6 384 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 OR8J1Q8NGP2 316 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 WDR48Q8TAF3 677 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 FOPNLQ96NB1 174 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 RACGAP1Q9H0H5 632 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 RNF121Q9H920 327 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 TXNL4BQ9NX01 149 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 B4DXG7 233 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 SGTAO43765 313 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 BCHEP06276 602 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 KLK1P06870 262 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 SRPRAP08240 638 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 ELNP15502 786 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 PCDH1Q08174 1060 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 MLLT11Q13015 90 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLBPQ14493 270 aaKnown RBP eCLIP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 TNFAIP8L2Q6P589 184 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 C22orf39Q6P5X5 142 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 WDR53Q7Z5U6 358 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 CREB3L4Q8TEY5 395 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 C16orf78Q8WTQ4 265 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 JPH3Q8WXH2 748 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 NELL2Q99435 816 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 NLNQ9BYT8 704 aa16.57■□□□□ 0.24
ARHGEF1-213ENST00000595897 TLX2O43763 284 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 ITGB7P26010 798 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 RPL3P39023 403 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.246e-8■■■■■ 52.5
ARHGEF1-213ENST00000595897 ILKQ13418 452 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SEC23BQ15437 767 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 GLYR1Q49A26 553 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 Q6ZNB5 142 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLCO4C1Q6ZQN7 724 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 FAM92BQ6ZTR7 304 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 NPAS4Q8IUM7 802 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 CADM2Q8N3J6 435 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 TRMT2BQ96GJ1 504 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 FZD3Q9NPG1 666 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SCN8AQ9UQD0 1980 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 CPNE3O75131 537 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 GALK2Q01415 458 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 MEF2AQ02078 507 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 CHRNEQ04844 493 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 PRKCZQ05513 592 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLC35F1Q5T1Q4 408 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 PLET1Q6UQ28 207 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 IQCF1Q8N6M8 205 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 GDPD1Q8N9F7 314 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 LMNTD1Q8N9Z9 388 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 C1GALT1C1Q96EU7 318 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 GIMAP4Q9NUV9 329 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 REV1Q9UBZ9 1251 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 MGAT4BQ9UQ53 548 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 DSPPQ9NZW4 1301 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 SDC2P34741 201 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 FAM214AQ32MH5 1076 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 Q5BKY6 102 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 TMIGD1Q6UXZ0 262 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 OR56A3Q8NH54 315 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 RNF170Q96K19 258 aa16.56■□□□□ 0.24
ARHGEF1-213ENST00000595897 IRF2BPLQ9H1B7 796 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms