RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 TBRG1Q3YBR2 411 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 C22orf42Q6IC83 251 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 Q6ZNX1 250 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 HSD11B1LQ7Z5J1 315 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 OR8J1Q8NGP2 316 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF300Q96RE9 604 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 NMNAT1Q9HAN9 279 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 SOHLH2Q9NX45 425 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 ENPP4Q9Y6X5 453 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 RNASET2O00584 256 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 TCF3P15923 654 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 MC1RQ01726 317 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC8B1Q6J4K2 584 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 Q6ZPB1 254 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 TRIM46Q7Z4K8 759 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 OR56A1Q8NGH5 318 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 TMEM138Q9NPI0 162 aa16.39■□□□□ 0.21
SMARCA4-215ENST00000590574 ANHXE9PGG2 379 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 FXYD1O00168 92 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 GTPBP1O00178 669 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CELF5Q8N6W0 485 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 RPL3LQ92901 407 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 NEIL2Q969S2 332 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 TMEM19Q96HH6 336 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CLSTN3Q9BQT9 956 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 H0YC42 278 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 NUAK1O60285 661 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CPNE3O75131 537 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 RTL4Q6ZR62 310 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CNDP2Q96KP4 475 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 NUP205Q92621 2012 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 SH3D21A4FU49 640 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC35F4A4IF30 521 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 GPR37L1O60883 481 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 ARL9Q6T311 187 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 MTG2Q9H4K7 406 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 STUB1Q9UNE7 303 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 H7C0S8 307 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 TGM5O43548 720 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 VLDLRP98155 873 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 CBLBQ13191 982 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 OAFQ86UD1 273 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 GHDCQ8N2G8 530 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 GNPDA2Q8TDQ7 276 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 RACGAP1Q9H0H5 632 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 XKR8Q9H6D3 395 aa16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 EXOSC1Q9Y3B2 195 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-215ENST00000590574 GNB5O14775 395 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF821O75541 412 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 CDK1P06493 297 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF8P17098 575 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 FPGSQ05932 587 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 CEP68Q76N32 757 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF551Q7Z340 670 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 CCDC116Q8IYX3 515 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 CHPT1Q8WUD6 406 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 UBTD2Q8WUN7 234 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 PDFQ9HBH1 243 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 AGAP5A6NIR3 686 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 PTTG1O95997 202 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 GNRH1P01148 92 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ACSL1P33121 698 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 LIMS2Q7Z4I7 341 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 B3GNT7Q8NFL0 401 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 GRHL3Q8TE85 626 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 GATAD2BQ8WXI9 593 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 WACQ9BTA9 647 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 P2RY12Q9H244 342 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 MARCH5Q9NX47 278 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 PRAMEF12O95522 483 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 LRR1Q96L50 414 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 AKAP7Q9P0M2 348 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 C5AR2Q9P296 337 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 SIPA1L1O43166 1804 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 SCN1AP35498 2009 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 JUNBP17275 347 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 JAZF1Q86VZ6 243 aa16.37■□□□□ 0.21
SMARCA4-215ENST00000590574 PRLP01236 227 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 DSG2Q14126 1118 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 NFE2L1Q14494 772 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 TRAM2Q15035 370 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 RTN4RL1Q86UN2 441 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 MEIOBQ8N635 442 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 WDR48Q8TAF3 677 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 NELL2Q99435 816 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 KCNK12Q9HB15 430 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 SHROOM3Q8TF72 1996 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms