RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DDX5P17844 614 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 GPX3P22352 226 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 CXCR2P25025 360 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ACADLP28330 430 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 NDUFS1P28331 727 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 CASP2P42575 452 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 MTTPP55157 894 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ACTR3P61158 418 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 AP2B1P63010 937 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 E2F2Q14209 437 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 KRT33BQ14525 404 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 HIST2H2ACQ16777 129 aaPredicted RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 AP5B1Q2VPB7 878 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 SAMD4BQ5PRF9 694 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 DCAF10Q5QP82 559 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 C6orf136Q5SQH8 315 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 FRG2Q64ET8 278 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 REP15Q6BDI9 236 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 HIST2H2AA3Q6FI13 130 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SHISA6Q6ZSJ9 500 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 THOC6Q86W42 341 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 BPHLQ86WA6 291 aaPredicted RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 TBC1D21Q8IYX1 336 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 GALNT16Q8N428 558 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 TMEM102Q8N9M5 508 aaPredicted RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 OR52E1Q8NGJ3 308 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 OR5K2Q8NHB8 316 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SELENOMQ8WWX9 145 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 LCN9Q8WX39 176 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 POP5Q969H6 163 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 ESAMQ96AP7 390 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SPDL1Q96EA4 605 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 CMTM7Q96FZ5 175 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 C3orf30Q96M34 536 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 LRFN5Q96NI6 719 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 TRAPPC9Q96Q05 1148 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 FRG2BQ96QU4 278 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 OR52A5Q9H2C5 316 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 VCX3BQ9H321 246 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 MUC13Q9H3R2 512 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SRMSQ9H3Y6 488 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 RNPEPL1Q9HAU8 725 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 LRTM1Q9HBL6 345 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 C1orf109Q9NX04 203 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 STOML1Q9UBI4 398 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SUCOQ9UBS9 1254 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 LEF1Q9UJU2 399 aaPredicted RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 PLAGL1Q9UM63 463 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SLC22A14Q9Y267 594 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ASF1AQ9Y294 204 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 TSC22D4Q9Y3Q8 395 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ASB1Q9Y576 335 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 GPR45Q9Y5Y3 372 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SNRNP200O75643 2136 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 DIDO1Q9BTC0 2240 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 CCDC154A6NI56 674 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 E7EQ34 232 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 H3BMH7 237 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 NR5A2O00482 541 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 PPP6CO00743 305 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 CFLARO15519 480 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 PEX11AO75192 247 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 EEDO75530 441 aaKnown RBP7.41□□□□□ -1.22
VMP1-204ENST00000587259 SLC16A8O95907 504 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 IL6P05231 212 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ERGP11308 486 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ME2P23368 584 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 GSTM2P28161 218 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 IMPA1P29218 277 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
VMP1-204ENST00000587259 RRADP55042 308 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 TBPL1P62380 186 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 RPL38P63173 70 aaKnown RBP7.41□□□□□ -1.22
VMP1-204ENST00000587259 SLC25A3Q00325 362 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 LRRC74AQ0VAA2 488 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 CHIT1Q13231 466 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 NAE1Q13564 534 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
VMP1-204ENST00000587259 MYBPC3Q14896 1274 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ABRAXAS2Q15018 415 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
VMP1-204ENST00000587259 CYP2A13Q16696 494 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 SPIN4Q56A73 249 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 FBXO48Q5FWF7 155 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 XKR6Q5GH73 641 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ZFP1Q6P2D0 407 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 PGM2L1Q6PCE3 622 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 LCTLQ6UWM7 567 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 MBOAT1Q6ZNC8 495 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 GK5Q6ZS86 529 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 MSANTD1Q6ZTZ1 278 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 PPP1R32Q7Z5V6 425 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 ADGRF3Q8IZF5 1079 aa7.41□□□□□ -1.22
VMP1-204ENST00000587259 KRT78Q8N1N4 520 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms