RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 IQANK1A0A1B0GTG1 560 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 A1L4Q6 167 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 WIPF3A6NGB9 483 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 TGFBR3LH3BV60 316 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 LDB3O75112 727 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 NEURL1O76050 574 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 TUBBP07437 444 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 SSR4P51571 173 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 PMP22Q01453 160 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 IFT88Q13099 833 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 CUL3Q13618 768 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 TEX35Q5T0J7 233 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 HSDL2Q6YN16 418 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 TIFABQ6ZNK6 161 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 MAMDC2Q7Z304 686 aaPredicted RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 MILR1Q7Z6M3 343 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 ARMC10Q8N2F6 343 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 ZCCHC7Q8N3Z6 543 aaKnown RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 RNF175Q8N4F7 328 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 RBM18Q96H35 190 aaKnown RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 DGAT2Q96PD7 388 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 SERPINI1Q99574 410 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 NTMT1Q9BV86 223 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 HES7Q9BYE0 225 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 OR8D2Q9GZM6 311 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 RPF2Q9H7B2 306 aaKnown RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 TRIM45Q9H8W5 580 aaPredicted RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 WDR41Q9HAD4 459 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 AHSPQ9NZD4 102 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 SUCOQ9UBS9 1254 aaKnown RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 ERVK-11Q9UQG0 969 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 KLF13Q9Y2Y9 288 aaPredicted RBP11.54□□□□□ -0.56
SS18-225ENST00000585121 MAST4O15021 2626 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 ICE1Q9Y2F5 2266 aa11.54□□□□□ -0.56
SS18-225ENST00000585121 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 ASPDHA6ND91 283 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 C17orf105B2RV13 164 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 KLRC4-KLRK1H3BQV0 150 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 PLPP1O14494 284 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 RIPK2O43353 540 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 NME2P1O60361 137 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 ITGA10O75578 1167 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 NME2P22392 152 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 MST1P26927 711 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 ID2Q02363 134 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 ERCC6LQ2NKX8 1250 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 ZNF468Q5VIY5 522 aaPredicted RBP11.53□□□□□ -0.56
SS18-225ENST00000585121 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.53□□□□□ -0.56
SS18-225ENST00000585121 LCA5Q86VQ0 697 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 FJX1Q86VR8 437 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 GPALPP1Q8IXQ4 340 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 CYP4Z2PQ8N1L4 340 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 POGLUT1Q8NBL1 392 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 OR5L2Q8NGL0 311 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 WDR20Q8TBZ3 569 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
SS18-225ENST00000585121 MTFMTQ96DP5 389 aaKnown RBP11.53□□□□□ -0.56
SS18-225ENST00000585121 ART5Q96L15 291 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
SS18-225ENST00000585121 TIMMDC1Q9NPL8 285 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 PCTPQ9UKL6 214 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 PPT2Q9UMR5 302 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 CLDN16Q9Y5I7 305 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
SS18-225ENST00000585121 CPAMD8Q8IZJ3 1885 aa11.52□□□□□ -0.56
SS18-225ENST00000585121 TRGV8A0A0C4DH27 118 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 ARHGAP10A1A4S6 786 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 A8MVJ9 347 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 OR7A17O14581 309 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 OTCP00480 354 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 RNF224P0DH78 156 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 GPR143P51810 404 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 NEK2P51955 445 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 PLIN5Q00G26 463 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 TNFRSF17Q02223 184 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
SS18-225ENST00000585121 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 FRG2Q64ET8 278 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 PAGE2Q7Z2X7 111 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 NUDT13Q86X67 352 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 LRRN4CLQ8ND94 238 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 OR52B6Q8NGF0 335 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 OR8K3Q8NH51 312 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 SLC2A12Q8TD20 617 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 ASB15Q8WXK1 588 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 RELTQ969Z4 430 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 ANKRD9Q96BM1 317 aaPredicted RBP11.52□□□□□ -0.57
SS18-225ENST00000585121 MAGED4Q96JG8 741 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 FRG2BQ96QU4 278 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 PELOQ9BRX2 385 aaKnown RBP11.52□□□□□ -0.57
SS18-225ENST00000585121 ELOVL6Q9H5J4 265 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 SEMA4BQ9NPR2 832 aaPredicted RBP11.52□□□□□ -0.57
SS18-225ENST00000585121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.52□□□□□ -0.57
SS18-225ENST00000585121 HPF1Q9NWY4 346 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 PSMC3IPQ9P2W1 217 aaPredicted RBP11.52□□□□□ -0.57
SS18-225ENST00000585121 ZGRF1Q86YA3 2104 aa11.52□□□□□ -0.57
SS18-225ENST00000585121 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms