RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 TRBC2A0A5B9 178 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ANHXE9PGG2 379 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 GDF9O60383 454 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PRSS23O95084 383 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 RPN2P04844 631 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 THRBP10828 461 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ACADLP28330 430 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ARSFP54793 590 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 DEPDC1Q5TB30 811 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 FCRLBQ6BAA4 426 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 SLC9B2Q86UD5 537 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 EGFL6Q8IUX8 553 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PRR22Q8IZ63 422 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 TP53I13Q8NBR0 393 aaPredicted RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 PIK3R3Q92569 461 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PIGKQ92643 395 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ZNF514Q96K75 400 aaPredicted RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 GAL3ST4Q96RP7 486 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 C9orf16Q9BUW7 83 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 SLC29A3Q9BZD2 475 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 KRT84Q9NSB2 600 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MUTYHQ9UIF7 546 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 GMEB2Q9UKD1 530 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MAFFQ9ULX9 164 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 LYVE1Q9Y5Y7 322 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MGAQ8IWI9 3026 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 IGKV1-8A0A0C4DH67 115 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PCDH17O14917 1159 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 OR10H2O60403 315 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 KCNK5O95279 499 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TGFBR1P36897 503 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 RGNQ15493 299 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 CDC73Q6P1J9 531 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 RRM2BQ7LG56 351 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 C16orf62Q7Z3J2 963 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 OOSP2Q86WS3 158 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFFL-212ENST00000584655 C11orf65Q8NCR3 313 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PHF10Q8WUB8 498 aaKnown RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 MESP1Q9BRJ9 268 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 ANKMY1Q9P2S6 941 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 EXO1Q9UQ84 846 aaKnown RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 GMPPBQ9Y5P6 360 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 KCNE1BA0A087WTH5 132 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TCRBV3S1A0A5B6 114 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 CASQ2O14958 399 aaPredicted RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 HMGN2P05204 90 aaKnown RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 RAP2AP10114 183 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 GGT1P19440 569 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PTX3P26022 381 aaPredicted RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 OR52E8Q6IFG1 317 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 ARL10Q8N8L6 244 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 L3MBTL4Q8NA19 623 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 GRHL3Q8TE85 626 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 RERGQ96A58 199 aaPredicted RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 REPS1Q96D71 796 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TMEM19Q96HH6 336 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 FEVQ99581 238 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 MAP3K3Q99759 626 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 SH3GL1Q99961 368 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 NRSN2Q9GZP1 204 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 FANCEQ9HB96 536 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 FAM60AQ9NP50 221 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 POLMQ9NP87 494 aaPredicted RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 SLC6A20Q9NP91 592 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 NLGN3Q9NZ94 848 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 AHSPQ9NZD4 102 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 CLCA3PQ9Y6N3 262 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TMEM247A6NEH6 219 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TNFRSF11BO00300 401 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 MAGEB3O15480 346 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PRMT3O60678 531 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 OPN1LWP04000 364 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PRR35P0CG20 571 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 WNT3P56703 355 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 PRDX1Q06830 199 aaKnown RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 GCNT6Q5T4J0 391 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 OR5M10Q6IEU7 315 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 TBC1D21Q8IYX1 336 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 NRSN1Q8IZ57 195 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 ATP6V1C2Q8NEY4 427 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 OR2L3Q8NG85 312 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 RAD18Q9NS91 495 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 IMPAD1Q9NX62 359 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 THUMPD1Q9NXG2 353 aaKnown RBP9.76□□□□□ -0.85
RFFL-212ENST00000584655 CPNE7Q9UBL6 633 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 ICE1Q9Y2F5 2266 aa9.76□□□□□ -0.85
RFFL-212ENST00000584655 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.75□□□□□ -0.85
RFFL-212ENST00000584655 P2RX6O15547 441 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 FABP3P05413 133 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 ST6GAL1P15907 406 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 FUT1P19526 365 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 CMPK1P30085 196 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 RAPSNQ13702 412 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 GXYLT1Q4G148 440 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 MLIPQ5VWP3 458 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 METTL25Q8N6Q8 603 aa9.75□□□□□ -0.85
RFFL-212ENST00000584655 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms