RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	OPTC	Q9UBM4	332 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	POU2F3	Q9UKI9	436 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CCL27	Q9Y4X3	112 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPR89A	B7ZAQ6	455 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	RFXAP	O00287	272 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TULP3	O75386	442 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CBR3	O75828	277 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPR89B	P0CG08	455 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	BCKDHA	P12694	445 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PCMT1	P22061	227 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ITPKA	P23677	461 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CD6	P30203	668 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PTGER3	P43115	390 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	POU6F2	P78424	691 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CHRNE	Q04844	493 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TP53BP2	Q13625	1128 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	KIAA0040	Q15053	153 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	SHH	Q15465	462 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TBRG1	Q3YBR2	411 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CACHD1	Q5VU97	1274 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ADGRD2	Q7Z7M1	963 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CDH24	Q86UP0	819 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	MICU2	Q8IYU8	434 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPR26	Q8NDV2	337 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	OR52J3	Q8NH60	311 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ALG14	Q96F25	216 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	APOLD1	Q96LR9	279 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	C1QTNF3	Q9BXJ4	246 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ATG10	Q9H0Y0	220 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LRTM1	Q9HBL6	345 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TREM1	Q9NP99	234 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	HEBP1	Q9NRV9	189 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PDP1	Q9P0J1	537 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ENPP5	Q9UJA9	477 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	EIF3L	Q9Y262	564 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	OR51B4	Q9Y5P0	310 aa		11.11	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063		A0A096LPI6	279 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	JRK	O75564	520 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	KLHL18	O94889	574 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ESR1	P03372	595 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GTF2E2	P29084	291 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	C21orf33	P30042	268 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	RYK	P34925	604 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	DAP	P51397	102 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CASP6	P55212	293 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TPTE	P56180	551 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CACNG1	Q06432	222 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPM6B	Q13491	265 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	DGKK	Q5KSL6	1271 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	RBM48	Q5RL73	367 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPR153	Q6NV75	609 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NIPAL1	Q6NVV3	410 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CHST9	Q7L1S5	443 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	VRK3	Q8IV63	474 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	DPP10	Q8N608	796 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ATG16L2	Q8NAA4	619 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	MAL2	Q969L2	176 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	MUL1	Q969V5	352 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	OMA1	Q96E52	524 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TOE1	Q96GM8	510 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CCDC74B	Q96LY2	380 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	FCRL4	Q96PJ5	515 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ROGDI	Q9GZN7	287 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZFYVE1	Q9HBF4	777 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GNPTG	Q9UJJ9	305 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LOC100506127	A0A0U1RQW1	187 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PGPEP1L	A6NFU8	196 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZNF98	A6NK75	572 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LINC00587	B1AMM8	73 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	FAM20B	O75063	409 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	RECQL5	O94762	991 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	OTC	P00480	354 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PDYN	P01213	254 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	OPN1SW	P03999	348 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NUDT7	P0C024	238 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	COX5B	P10606	129 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	HOXB8	P17481	243 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	AHCY	P23526	432 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	VIPR2	P41587	438 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GNPDA1	P46926	289 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NRIP1	P48552	1158 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ATP12A	P54707	1039 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	RPS26	P62854	115 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	VLDLR	P98155	873 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	EPS8	Q12929	822 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ABR	Q12979	859 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NFATC2	Q13469	925 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	COLEC12	Q5KU26	742 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LY6G5C	Q5SRR4	150 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	IRAK1BP1	Q5VVH5	260 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZNF621	Q6ZSS3	439 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LNX2	Q8N448	690 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PROX1	Q92786	737 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PTP4A1	Q93096	173 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZNF347	Q96SE7	839 aa		11.1	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CTRC	Q99895	268 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms