RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SLC38A9Q8NBW4 561 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 EXOSC8Q96B26 276 aaKnown RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 ROPN1LQ96C74 230 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 CTRCQ99895 268 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 STRADBQ9C0K7 418 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 RPF2Q9H7B2 306 aaKnown RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 HCN3Q9P1Z3 774 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 NDOR1Q9UHB4 597 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 MAU2Q9Y6X3 613 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 SPACA6W5XKT8 324 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 CFAP54Q96N23 3096 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 PRSS51A0A1B0GVH4 220 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 FXYD1O00168 92 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 RNASET2O00584 256 aaKnown RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 GYG2O15488 501 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 CSO75390 466 aaKnown RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 FTH1P19P0C7X4 201 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 EFNA1P20827 205 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 TLX1P31314 330 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 OR1D4P47884 311 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 RAB38P57729 211 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 SNCBQ16143 134 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 SYT16Q17RD7 645 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 HES3Q5TGS1 186 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 DLEU7Q6UYE1 221 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 HACD2Q6Y1H2 254 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 CLECL1Q8IZS7 167 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 DNAJB14Q8TBM8 379 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 MIEF2Q96C03 454 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 KLHL29Q96CT2 875 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 RMND5AQ9H871 391 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 IL1RL2Q9HB29 575 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 AKAP7Q9P0M2 348 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-217ENST00000583683 UTS2RQ9UKP6 389 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 CLCA2Q9UQC9 943 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 ERVK-11Q9UQG0 969 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 MAN2B2Q9Y2E5 1009 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 PCDHB3Q9Y5E6 796 aa17.12■□□□□ 0.33
NDEL1-217ENST00000583683 FAM227AF5H4B4 570 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 TMX2-CTNND1H3BSU7 103 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 HNRNPFP52597 415 aaKnown RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 PCBP4P57723 403 aaKnown RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 NFYCQ13952 458 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 TRMT5Q32P41 509 aaKnown RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 C6orf10Q5SRN2 563 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 ANXA8L1Q5VT79 327 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 C8orf82Q6P1X6 216 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 PRMT9Q6P2P2 845 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 TMEM52Q8NDY8 209 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 VPS37AQ8NEZ2 397 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 LRRC58Q96CX6 371 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 RNF31Q96EP0 1072 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 LIN37Q96GY3 246 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-217ENST00000583683 ITCHQ96J02 903 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 SLC39A3Q9BRY0 314 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 INPP5KQ9BT40 448 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 WDR41Q9HAD4 459 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 SLC35C2Q9NQQ7 365 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 PRDM9Q9NQV7 894 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 CDC14AQ9UNH5 594 aa17.11■□□□□ 0.33
NDEL1-217ENST00000583683 B4E171 279 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 KCNH1O95259 989 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 NPPAP01160 153 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 RNH1P13489 461 aaKnown RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 DDX5P17844 614 aaKnown RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 TSPAN7P41732 249 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 FRKP42685 505 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 C1orf189Q5VU69 101 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 OR51Q1Q8NH59 317 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PEX11GQ96HA9 241 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 CCDC115Q96NT0 180 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 DEPDC7Q96QD5 511 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 SLC7A5P2Q9GIP4 190 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 SLC6A13Q9NSD5 602 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 BTNL2Q9UIR0 455 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 LOXL2Q9Y4K0 774 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 MGRN1O60291 552 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 NTRK1P04629 796 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 ITIH1P19827 911 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PTPN6P29350 595 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 CDKN2CP42773 168 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 DSG2Q14126 1118 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 CAPRIN1Q14444 709 aaKnown RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 OR52E8Q6IFG1 317 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 RAB11FIP2Q7L804 512 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 DHDDSQ86SQ9 333 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 DEFB107AQ8IZN7 70 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PMEPA1Q969W9 287 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 GBP5Q96PP8 586 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PANX1Q96RD7 426 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 GPATCH1Q9BRR8 931 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms