RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 BRF2Q9HAW0 419 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 MID1IP1Q9NPA3 183 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 ADAP2Q9NPF8 381 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 NMRK1Q9NWW6 199 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 MKS1Q9NXB0 559 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 STMN3Q9NZ72 180 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 ABI3Q9P2A4 366 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 ATG4BQ9Y4P1 393 aa11.79□□□□□ -0.52
SMARCE1-218ENST00000582955 SPENQ96T58 3664 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CCDC151A5D8V7 595 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 PRKRAO75569 313 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CRCPO75575 148 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 WISP1O95388 367 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ESRRBO95718 433 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 WDPCPO95876 746 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 KLK1P06870 262 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 NR2F6P10588 404 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 TNNI3P19429 210 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 DNAJB13P59910 316 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 NAA20P61599 178 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 FOXK1P85037 733 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 SERTAD2Q14140 314 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ZNF169Q14929 603 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ELAVL1Q15717 326 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 INPP5JQ15735 1006 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 MEP1AQ16819 746 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ACER2Q5QJU3 275 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 LIPMQ5VYY2 423 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 H3F3CQ6NXT2 135 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 FRMD7Q6ZUT3 714 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CRLF3Q8IUI8 442 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 OR4N5Q8IXE1 308 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 BEST3Q8N1M1 668 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 METTL4Q8N3J2 472 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 BANPQ8N9N5 519 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 NFAM1Q8NET5 270 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 B3GNT7Q8NFL0 401 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 OR1N1Q8NGS0 311 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 AGAP11Q8TF27 550 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 KCNA7Q96RP8 456 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 TMEM109Q9BVC6 243 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 WDR41Q9HAD4 459 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 OXSMQ9NWU1 459 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 PLLPQ9Y342 182 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 ASB4Q9Y574 426 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 TIMM22Q9Y584 194 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CLDN16Q9Y5I7 305 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 CLCA3PQ9Y6N3 262 aa11.78□□□□□ -0.52
SMARCE1-218ENST00000582955 TRBV11-1A0A0K0K1C0 115 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 OR5H15A6NDH6 313 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 GLOD5A6NK44 160 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 RGS16O15492 202 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 PROM1O43490 865 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 FGF17O60258 216 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ULK1O75385 1050 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 AIFM1O95831 613 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 HSD3B1P14060 373 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 HSD3B2P26439 372 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 HTR6P50406 440 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ST13P50502 369 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CLCN2P51788 898 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 FOLH1Q04609 750 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF844Q08AG5 666 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CSTF3Q12996 717 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 PCLAFQ15004 111 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 TERF2Q15554 542 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CCNYL2Q5T2Q4 361 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 MRM1Q6IN84 353 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 COMMD6Q7Z4G1 85 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 C10orf107Q8IVU9 208 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 TMEM132CQ8N3T6 1108 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 SUN3Q8TAQ9 357 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 HAS2Q92819 552 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 TANKQ92844 425 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 DAZLQ92904 295 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 NCLNQ969V3 563 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 MIB2Q96AX9 1013 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ANKRD9Q96BM1 317 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ZBTB9Q96C00 473 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 VMP1Q96GC9 406 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 DGAT2Q96PD7 388 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 DEFB126Q9BYW3 111 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 SHCBP1LQ9BZQ2 653 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CENPHQ9H3R5 247 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 VPS29Q9UBQ0 182 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 VTI1BQ9UEU0 232 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 ADAM29Q9UKF5 820 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 PCDHGA10Q9Y5H3 936 aa11.77□□□□□ -0.53
SMARCE1-218ENST00000582955 CPAMD8Q8IZJ3 1885 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 TRAV17A0A0B4J275 112 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 A0A1W2PR48 441 aa11.76□□□□□ -0.53
SMARCE1-218ENST00000582955 GABRR3A8MPY1 467 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms