RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TMEM52Q8NDY8 209 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 SLC2A12Q8TD20 617 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 NINJ1Q92982 152 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 KRT12Q99456 494 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 DERL2Q9GZP9 239 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 PRDM7Q9NQW5 492 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 SNX12Q9UMY4 172 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 CLDN16Q9Y5I7 305 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 ITPR3Q14573 2671 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 TRGV5A0A0B4J1U4 118 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 PINLYPA6NC86 204 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 G3V3Y1 287 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 TGFBR3LH3BV60 316 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 TCP1P17987 556 aaKnown RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 CERS1P27544 350 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 TLX1P31314 330 aaPredicted RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 HNRNPFP52597 415 aaKnown RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 IRF8Q02556 426 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 SF3B4Q15427 424 aaKnown RBP eCLIP16.56■□□□□ 0.24
MKS1-209ENST00000580127 PDK4Q16654 411 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 PIGGQ5H8A4 983 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 RPRMLQ8N4K4 120 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 ART5Q96L15 291 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 F2RL3Q96RI0 385 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 FOXC2Q99958 501 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 CENPKQ9BS16 269 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 POLDIP3Q9BY77 421 aaKnown RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 PHACTR1Q9C0D0 580 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 RHOJQ9H4E5 214 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 MS4A12Q9NXJ0 267 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 CD274Q9NZQ7 290 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 ZNF490Q9ULM2 529 aaPredicted RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 BOKQ9UMX3 212 aaPredicted RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 PCDHGB3Q9Y5G1 929 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 PSAT1Q9Y617 370 aa16.56■□□□□ 0.24
MKS1-209ENST00000580127 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.56■□□□□ 0.24
MKS1-209ENST00000580127 HSPB2A8KAH6 182 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 CPN2P22792 545 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 IVDP26440 423 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 SERPINB1P30740 379 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 KIR2DL3P43628 341 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 KCNJ2P63252 427 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 DR1Q01658 176 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 PDIA2Q13087 525 aaKnown RBP16.55■□□□□ 0.24
MKS1-209ENST00000580127 DOC2AQ14183 400 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 HSPB2Q16082 182 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 C18orf21Q32NC0 220 aaPredicted RBP16.55■□□□□ 0.24
MKS1-209ENST00000580127 C1orf185Q5T7R7 199 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 SLC35F6Q8N357 371 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 ACOT4Q8N9L9 421 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 GOT1L1Q8NHS2 421 aaPredicted RBP16.55■□□□□ 0.24
MKS1-209ENST00000580127 ANKRD49Q8WVL7 239 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 CDKL2Q92772 493 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 MOCS1Q9NZB8 636 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 CNIH4Q9P003 139 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 ADGRE2Q9UHX3 823 aa16.55■□□□□ 0.24
MKS1-209ENST00000580127 A0A0G2JNJ9 132 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 LDB3O75112 727 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 CCDC166P0CW27 439 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 SERPINB3P29508 390 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 DNASE1L1P49184 302 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 IST1P53990 364 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 ASPHQ12797 758 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 ZNF460Q14592 562 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 TBCCQ15814 346 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 RIPPLY2Q5TAB7 128 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 WDR53Q7Z5U6 358 aaPredicted RBP16.54■□□□□ 0.24
MKS1-209ENST00000580127 LIX1Q8N485 282 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 NUBPLQ8TB37 319 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 SREK1Q8WXA9 508 aaKnown RBP16.54■□□□□ 0.24
MKS1-209ENST00000580127 TANKQ92844 425 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 WDR34Q96EX3 536 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 SENP5Q96HI0 755 aaPredicted RBP16.54■□□□□ 0.24
MKS1-209ENST00000580127 CSF3RQ99062 836 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 PLAC1Q9HBJ0 212 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 QPCTLQ9NXS2 382 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 TUBA8Q9NY65 449 aaPredicted RBP16.54■□□□□ 0.24
MKS1-209ENST00000580127 Q9UFV3 132 aa16.54■□□□□ 0.24
MKS1-209ENST00000580127 ABCA4P78363 2273 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 A0A0G2JMM0 328 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 IQANK1A0A1B0GTG1 560 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 MYOCOSA0A1B0GUC4 107 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 A0A1W2PPB8 328 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 A0A1W2PRS3 328 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 KIR3DP1A8MWS1 328 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 CTAG2O75638 210 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 DNASE1P24855 282 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
MKS1-209ENST00000580127 MSH2P43246 934 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 RPL21P46778 160 aaKnown RBP16.53■□□□□ 0.24
MKS1-209ENST00000580127 HSPA7P48741 367 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 CHIT1Q13231 466 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 KLHL7Q8IXQ5 586 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 BBOF1Q8ND07 529 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 FBXO36Q8NEA4 188 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms