RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 ERN1O75460 977 aaKnown RBP13.16□□□□□ -0.3
RNF43-202ENST00000577625 SEMA4FO95754 770 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 IGLV3-19P01714 112 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 HTR3AP46098 478 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 RGS19P49795 217 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 C6orf141Q5SZD1 244 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 MSRB3Q8IXL7 192 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 UBE2E3Q969T4 207 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 FERD3LQ96RJ6 166 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 RPRD1BQ9NQG5 326 aaKnown RBP13.16□□□□□ -0.3
RNF43-202ENST00000577625 IMP3Q9NV31 184 aaKnown RBP13.16□□□□□ -0.3
RNF43-202ENST00000577625 C2orf42Q9NWW7 574 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 SLC25A37Q9NYZ2 338 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
RNF43-202ENST00000577625 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 OR52A4PA6NMU1 304 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 LRATO95237 230 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 IL7RP16871 459 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 IDSP22304 550 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 DGKEP52429 567 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 RAE1P78406 368 aaKnown RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 SRSF11Q05519 484 aaKnown RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 UAP1L1Q3KQV9 507 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 LEXMQ3ZCV2 418 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 ENPP7Q6UWV6 458 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ZNF852Q6ZMS4 543 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PROSER1Q86XN7 944 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 FAM129CQ86XR2 697 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 CADM2Q8N3J6 435 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ZNF740Q8NDX6 193 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ITCHQ96J02 903 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 WDR92Q96MX6 357 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 CAMK1GQ96NX5 476 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 NODALQ96S42 347 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 TM9SF3Q9HD45 589 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PRDM8Q9NQV8 689 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 SIRT5Q9NXA8 310 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 CA14Q9ULX7 337 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 MDC1Q14676 2089 aaKnown RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 A0A096LPI6 279 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 TEX51A0A1B0GUA7 166 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 SH3BGRLO75368 114 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 APOA1P02647 267 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 UMPSP11172 480 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 IL32P24001 234 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PSMB5P28074 263 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PTGS2P35354 604 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PIK3CBP42338 1070 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 KIR3DL1P43629 444 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ASMTP46597 345 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 OR2B6P58173 313 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 OR4D2P58180 307 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 VBP1P61758 197 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 GPLD1P80108 840 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
RNF43-202ENST00000577625 SF1Q15637 639 aaKnown RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 UGT8Q16880 541 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 LYPD8Q6UX82 237 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 UTS2BQ765I0 119 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 SYT13Q7L8C5 426 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 GATAD2AQ86YP4 633 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 UBQLNLQ8IYU4 475 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 TMEM145Q8NBT3 493 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ZNF583Q96ND8 569 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 BDH2Q9BUT1 245 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 ALOXE3Q9BYJ1 711 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PCBD2Q9H0N5 130 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 C6orf106Q9H6K1 298 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 PAQR5Q9NXK6 330 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.15□□□□□ -0.3
RNF43-202ENST00000577625 MAGEL2Q9UJ55 1249 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 USP22Q9UPT9 525 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 MAPRE3Q9UPY8 281 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.3
RNF43-202ENST00000577625 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
RNF43-202ENST00000577625 TCRBV5S2A0A599 114 aa13.14□□□□□ -0.31
RNF43-202ENST00000577625 CHURC1-FNTBB4DL54 471 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms