RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SGO1Q5FBB7 561 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 PAGE2BQ5JRK9 111 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 METTL2BQ6P1Q9 378 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 KIRREL2Q6UWL6 708 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 LRIG3Q6UXM1 1119 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 ZCCHC23Q6ZST2 131 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 FRMD7Q6ZUT3 714 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 LANCL3Q6ZV70 420 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CCNYL1Q8N7R7 359 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 FAM169BQ8N8A8 192 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CDYL2Q8N8U2 506 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 OR2L5Q8NG80 312 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 AGAP11Q8TF27 550 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 TSLPQ969D9 159 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 UCN3Q969E3 161 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 ARL8AQ96BM9 186 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 MIEF2Q96C03 454 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 ANAPC16Q96DE5 110 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 WBP1Q96G27 269 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 PKNOX2Q96KN3 472 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CSF3RQ99062 836 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 TM9SF2Q99805 663 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CRB3Q9BUF7 120 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 GATA5Q9BWX5 397 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 PITHD1Q9GZP4 211 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 VN1R1Q9GZP7 353 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 REXO4Q9GZR2 422 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CENPHQ9H3R5 247 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 ANKHQ9HCJ1 492 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 TSC22D4Q9Y3Q8 395 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 TIMM22Q9Y584 194 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CLDN16Q9Y5I7 305 aa8.91□□□□□ -0.98
NPLOC4-219ENST00000576713 CCDC88CQ9P219 2028 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 NUP210LQ5VU65 1888 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 IGHV3-20A0A0C4DH32 117 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 WASHC1A8K0Z3 465 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 IDSB3KWA1 339 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 RGS13O14921 159 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 UGDHO60701 494 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 PRKRAO75569 313 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 C1QL1O75973 258 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 PDYNP01213 254 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 PRB1P04280 392 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 CHRNGP07510 517 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 NR1D1P20393 614 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 SERPINB3P29508 390 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 DNAJB13P59910 316 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 HIST2H2ACQ16777 129 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 GGTA1PQ4G0N0 100 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 DEPDC1Q5TB30 811 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 KHDRBS2Q5VWX1 349 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 FRG2Q64ET8 278 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 HIST2H2AA3Q6FI13 130 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 BORAQ6PGQ7 559 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 SCIMPQ6UWF3 145 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 ABHD13Q7L211 337 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 TBC1D19Q8N5T2 526 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 TTLQ8NG68 377 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 OR11G2Q8NGC1 345 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 OR6Y1Q8NGX8 325 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 ATP6V1E2Q96A05 226 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 TLCD1Q96CP7 247 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 PGM2Q96G03 612 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 FRG2BQ96QU4 278 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 SMC6Q96SB8 1091 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 ZNF382Q96SR6 550 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 MAPKAP1Q9BPZ7 522 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 WDR77Q9BQA1 342 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 EFHD1Q9BUP0 239 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 TMBIM4Q9HC24 238 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 MLXIPLQ9NP71 852 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 MKKSQ9NPJ1 570 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 P4HTMQ9NXG6 502 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 KCMF1Q9P0J7 381 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 C3orf18Q9UK00 162 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 CDC14AQ9UNH5 594 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 MAN2B2Q9Y2E5 1009 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 PTGDR2Q9Y5Y4 395 aa8.9□□□□□ -0.98
NPLOC4-219ENST00000576713 SCN3AQ9NY46 2000 aa8.9□□□□□ -0.99
NPLOC4-219ENST00000576713 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.99
NPLOC4-219ENST00000576713 MYOCOSA0A1B0GUC4 107 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ARHGAP10A1A4S6 786 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TMEM233B4DJY2 109 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 MANBAO00462 879 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 CYR61O00622 381 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 TMPRSS11DO60235 418 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 B4GALT2O60909 372 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ERLIN1O75477 346 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 SCELO95171 688 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ESRRBO95718 433 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 OTCP00480 354 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 GBAP04062 536 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 FHP07954 510 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 COX6A1P12074 109 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 MAOAP21397 527 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 MMP11P24347 488 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 ATP5A1P25705 553 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 GSTM2P28161 218 aa8.89□□□□□ -0.99
NPLOC4-219ENST00000576713 PPP2R1BP30154 601 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms